Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03731 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGAACTTCTGCGGGAAAATAAGAGAATGTTGGACAAATCAATTAGAGAAATTGAGCGCGAGAGGCAAGGTTTACAAACACAAGAGAAGAAATTGATTGCGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAGAGTCATGGCAAGAGATCTTGTTAGAACAAGGCATCAGATTGAAAAGTTTTATAAGCTAAAATCACAGCTCCAAGGTGTATCACTCAGAATTCAGACTTTGAAATCAACACAAGCAATGGGTGAGGCTATGAAAGGTGTGACAAAGGCCATGGGGCAAATGAATAGGCAGATGAACTTGCCATCTTTGCAGAAAATCATGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGATGACTGAGGTGATGGGTGATGCAATAGATGATGCTTTGGAAGGGGATGAAGAAGAAGAAGAAACAGACGAACTAGTGAGCCAGGTTCTTGACGAGATTGGAATTAACATAAACCAAGAGCTTGTGAATGCACCATCATCAGCTGTTGCTGCCCCAGCTGCCAAGACTAAGGTACCTCAAGTTGAAACTACAGGGAATGACGATACCGGGATAGATAGTGATTTACAGGCAAGGTTAGACAATTTAAGAAAAATGTAG 672 0.4137 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMARDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELMTEVMGDAIDDALEGDEEEEETDELVSQVLDEIGININQELVNAPSSAVAAPAAKTKVPQVETTGNDDTGIDSDLQARLDNLRKM. 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03731 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 221 IPR005024 GO:0007034
Seca6g03731 223 MobiDBLite consensus disorder prediction 185 223 - -
Seca6g03731 223 Coils Coil 119 142 - -
Seca6g03731 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Seca6g03731 223 Coils Coil 12 46 - -
Seca6g03731 223 Gene3D - 6 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03731 Seca-Chr6 104611529 104614381 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03731 K12191 - gmx:100526885 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03731 6 104611529 104614381 Seca6g03731 6 104611529 104614381 ECH
Seca12g00654 12 5891255 5893475 Seca6g03731 6 104611529 104614381 PCT