Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00654 ATGCACTTTGTATTGGTTTCCTTGTATCTGATTGTGAAGTTGTTACTTTCAGAACTTCTGCGGGAAAATAAGAGAATGTTGGACAAATCAATTAGAGAAATAGAACGAGAGAGACAAGGTTTACAGTCACAGGAGAAGAAACTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAGAGTGATGGCAAAAGATCTTGTCAGAACAAGGCATCAGATTGAAAAGTTTTATAAGCTTAAATCACAGCTCCAGGGTGTATCACTCAGAATTCAAACTTTGAAGTCAACACAAGCAATGGGTGAGGCAATGAAAGGTGTGACAAAGGCAATGGGACAGATGAATAGACGGATGAACTTGCCATCTTTGCAGAAAATCATGCTAGAATTTGAGAGACAAAATGAGAAAATGGAATTGATTAGTGAAGTGATGGGAGATGCCATAGATGATGCTTTGGAAGGAGACGAGGAAGAAGAAGAAACAGAAGAACTAGTGAACCAGGTTCTTGATGAGATTGGAATTGACATAAACCAAGAGCTTTTGAATGCACCATCATCAGCTGTTGCTGCCCCTGCTGCAAAAGCTAAGGTTCCTCAAGTTGAAACTGCTGGGAATGATGATGCGGGTATAGATAGTGATTTACAAGCAAGGTTAGACAATTTAAGAAAAATGTAA 687 0.393 MHFVLVSLYLIVKLLLSELLRENKRMLDKSIREIERERQGLQSQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRMNLPSLQKIMLEFERQNEKMELISEVMGDAIDDALEGDEEEEETEELVNQVLDEIGIDINQELLNAPSSAVAAPAAKAKVPQVETAGNDDAGIDSDLQARLDNLRKM. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00654 228 Gene3D - 13 185 - -
Seca12g00654 228 MobiDBLite consensus disorder prediction 191 215 - -
Seca12g00654 228 Pfam Snf7 22 191 IPR005024 GO:0007034
Seca12g00654 228 Coils Coil 17 51 - -
Seca12g00654 228 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 18 226 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00654 Seca-Chr12 5891255 5893475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00654 K12191 - mnt:21409971 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00654 12 5891255 5893475 Seca12g00654 12 5891255 5893475 ECH
Seca12g00654 12 5891255 5893475 Seca6g03731 6 104611529 104614381 PCT