Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03714 ATGGCTGGAATTGCAAAGGAGGAAGAGTCAGGTAGTCCTAGTTGGGGTGCTTCGTTTTTTATGCAGACAACAGAGGATGTGGCTAGAGCTGTCGCTGCTGCTATGAATTCTCCAAGGCCATCTGTGGTATATTCATCTAAAAATGATCATGGTGGTAGTCAACTTCAAAGGCTGCAGTATCAAGTTACAAAAATGATAAAAGGCTTTTCTCGCCCTCCTGAAATTAAATATACAAATTACAATCCAGAAATCCTGACAAGTCAGAAGCGTCAATGGGCTGCAAACTTTCATTTGCAGTATATGGATCATAAGTCTTGGAAGGAGCCAACAAAGCTGTTTGAAAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGTCAATATGTTGTTAGAAAGTCTGAAGGCTCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAATCCCGTGTAGAGCCCAATCTTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGACAAAGATCTTCTTTCTTTCTGCTTCCCTGGAGGCCTGGAGGTTAAAGCTGTGGAGAGAACCCCATCCATGAGTGAGTTGAATGAAATTCTTTATGGACAGGAACACCTCAAACAAAGGGATCTGTCTTTTGTATTTAGGTTACAGGGTGCTGATAATTCAACGCTTTATGGGTGCTGTGTCTTAGTTGAAGAGCTAGTGCAAAAACCTTCTGGATTGCTCTCTCTGATTTCGGAGAAGCAGTCATCTCACTCTTCTTTGAGACGCCATATATTAACCACACAGAGATGTTATTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCATGCAAGAAAGGCTAGAGCGGTTGACAAAAAGTGTTGGAGATTTAAATTTAGAATTTCTTGAAGGTAATTACGAGGATGAGAACTCAGAGGGAAATTCAGTGTGTGTGTTGGTGAATGATAGACTAAGAGAAGACAGGCTTGATGAGAATCCAAGAATTTCTCAATCAAACCTTTCCCTACCTGAAAACATTGAGAGTGATAGTAGTCATCCAGAGAAACACATGATTAATGAGAAGCAGCATACATTTAAGGACGGAGTCAATGATGACAGTGTTGAGCCAATTGATTCTGAAACTGAGAGAAAAACTGCCAAAGAAGAATCTGACTCTACAAATGCTGAAGATAGTGATCTGTATGGAGATGGTTTTGTAACAAACAAACAGTCAGAAGATAGGCGTTTACCAAATGCCATTTTGCCACTCCTGCGCTATAGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGTTCACCTTGTGAGGATAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGAGGCTTCAGTCTCTGGCCAAGAGGATTTAAATGACCTACATGATATTCTTGAATGGGCTAAGGCAAATAACTGTGGACCATTACAGATTATTAGTGAGTATTATCGTTTAAGTTGCCCTGCAAGGGGCTCATCAATTATCTTTCGTCCTTTGGAGCACCTTCATCCATTGGAATATCACAGACCAGATGAGACAGTTCTTTATCTTGCTGGTTCAACTGTTGATTTGAAATCTTGCAGTACGGGTTTGGAATTAGCTGAGGCTCATAACTCACTTCTGGCTGAGGAGGAGGCAACTGCATTATCTCTATGGGCTGTTGCATGCTTATGTGGTACCTTGAGACTTGAACATGTGTTAACATTCTTTGCGGGAGCACTACTGGAGAAGCAAATAGTAGTCGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCGCTAATCCGGCCCTACCAATGGCAAAGCCTGCTAATGCCGGTTTTACCAAATGACATGCTTGAGTTTCTGGATGCACCTGTCCCTTACGTAGTTGGTGTCAGGAACAAGACCAATGAAGTTCAGTCAAAGTTAACCAATGTTATGCTGGTTGACGCCAATAGAAACCAGGTGAAGTCATCAACAATACCTCAATTGCCAAAACAGAAAGAACTAATATCTTCTTTACGTCCTTATCATGCAACCCTAGTGGGAGAAAGTTACTTGGGCAGGAGAAGGCCAGTGTATGAATGCACGGAAGTGCAGATAGAAGCTGCCAAGAATTTCTTATCGGTGCTAAGGACTTATTTGGATTCCCTTTGCTGTAACATCCGTTCTCATACAATAACCAATGTACAATCCAATGACGATAAGGTATCCTTGCTTTTGAAAGAGAGTTTCATTGACTCATTCCCTTATCGTGATCGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTTCACACAGATCTTGTTCTCTCTTTCTTCCAAAAGGAATAG 2412 0.4121 MAGIAKEEESGSPSWGASFFMQTTEDVARAVAAAMNSPRPSVVYSSKNDHGGSQLQRLQYQVTKMIKGFSRPPEIKYTNYNPEILTSQKRQWAANFHLQYMDHKSWKEPTKLFESMVVVGLHPNCDIQALQSQYVVRKSEGSGKLRSALGYQNQSRVEPNLEPQVLFVYPPEKQLPLKDKDLLSFCFPGGLEVKAVERTPSMSELNEILYGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLISEKQSSHSSLRRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTKSVGDLNLEFLEGNYEDENSEGNSVCVLVNDRLREDRLDENPRISQSNLSLPENIESDSSHPEKHMINEKQHTFKDGVNDDSVEPIDSETERKTAKEESDSTNAEDSDLYGDGFVTNKQSEDRRLPNAILPLLRYSQYESSESSCSFQGSPCEDRNFRSDADDTETEEASVSGQEDLNDLHDILEWAKANNCGPLQIISEYYRLSCPARGSSIIFRPLEHLHPLEYHRPDETVLYLAGSTVDLKSCSTGLELAEAHNSLLAEEEATALSLWAVACLCGTLRLEHVLTFFAGALLEKQIVVVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEFLDAPVPYVVGVRNKTNEVQSKLTNVMLVDANRNQVKSSTIPQLPKQKELISSLRPYHATLVGESYLGRRRPVYECTEVQIEAAKNFLSVLRTYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKLFVDTQLFSVHTDLVLSFFQKE. 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03714 803 Gene3D - 574 739 IPR043153 -
Seca6g03714 803 SMART uDENN_cls 109 242 IPR005113 -
Seca6g03714 803 MobiDBLite consensus disorder prediction 447 479 - -
Seca6g03714 803 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 45 799 - -
Seca6g03714 803 MobiDBLite consensus disorder prediction 343 423 - -
Seca6g03714 803 Pfam uDENN domain 163 240 IPR005113 -
Seca6g03714 803 SMART DENN_cls 271 677 IPR001194 -
Seca6g03714 803 Pfam DENN (AEX-3) domain 561 675 IPR001194 -
Seca6g03714 803 MobiDBLite consensus disorder prediction 362 408 - -
Seca6g03714 803 Gene3D - 100 312 - -
Seca6g03714 803 ProSiteProfiles Tripartite DENN domain profile. 147 803 IPR037516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03714 Seca-Chr6 104390215 104402439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03714 - - gmx:100782148 1389.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03714 6 104390215 104402439 Seca6g03714 6 104390215 104402439 ECH
Seca12g00640 12 5753571 5770161 Seca6g03714 6 104390215 104402439 PCT