Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03697 ATGGTTGAGGCTCTTAGCCTTTACAAGAAGTGGAAAGGTTACAATCTGGATTATGAAGGATTACAGAACATGGTTTTCACCTTAAAAGAACCCAATTCCTGTTTGGTTAAGAACAATGGAATCAGAATTTCCGTTGAACCCAGGGCTATGAGTAGCAAAGGCTGGAACTTTGAGATCAGGGGCTATTTCCCTGATAAGTGTTGTAGCATTGTTGATACTAGGGGCAACATAGTAGCCCAGGTTGGGATGAATAAGGAAGTGGAGAAATTGATGGAAAGCAAGGATGTGTATCATGTGGTGGTGAAACCAGGGATGGATCAAGCTTTTGTTTTTGGTGTCATTGCCATCCTTGACTACATTTATGGCGAATCCACAAACTGCTAA 384 0.4167 MVEALSLYKKWKGYNLDYEGLQNMVFTLKEPNSCLVKNNGIRISVEPRAMSSKGWNFEIRGYFPDKCCSIVDTRGNIVAQVGMNKEVEKLMESKDVYHVVVKPGMDQAFVFGVIAILDYIYGESTNC. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03697 127 Gene3D - 2 125 IPR038595 -
Seca6g03697 127 Pfam LURP-one-related 4 116 IPR007612 -
Seca6g03697 127 PANTHER - 9 122 IPR007612 -
Seca6g03697 127 SUPERFAMILY Tubby C-terminal domain-like 4 121 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03697 Seca-Chr6 104230707 104232183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03697 - - gmx:100810645 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03697 6 104230707 104232183 Seca6g03697 6 104230707 104232183 ECH
Seca12g00611 12 5509977 5511309 Seca6g03697 6 104230707 104232183 PCT