Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00611 ATGCGTCGAAAGGGAGGCATGGTTGAGGCCCTGAGCATTTACAGGAAGTGGAAAAGTTACAGTTTAGACTATGAAGGATCACAGAAGCTGGTTTTCAGCTTAAAAAAACCCAACAATTCTTGTTTGGTTAAGAAGAATGCAATCAGAATCTCCACTGAACCGAGGACCATTACTAACAAAGGCTGGGACTTTGAGATCAGTGGCTATTTCCCAGATAAGTTATGTAGCATTGTTGACTCTAAAGGCAATGAGGTAGCTCAGGTACGGATGAAGAAAGAAGTGGAGGAATTGATGGAAAGCAAGGATCTTTACCATGTAGTGGTGAAACCCGGGATAGATCAAGCTTTTGTTTTTGGAGTCATTGCTATTCTTGACTACATTTATGGTGAATCTACTGTCTGCTAG 405 0.4148 MRRKGGMVEALSIYRKWKSYSLDYEGSQKLVFSLKKPNNSCLVKKNAIRISTEPRTITNKGWDFEISGYFPDKLCSIVDSKGNEVAQVRMKKEVEELMESKDLYHVVVKPGIDQAFVFGVIAILDYIYGESTVC. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00611 134 SUPERFAMILY Tubby C-terminal domain-like 10 128 IPR025659 -
Seca12g00611 134 Gene3D - 1 132 IPR038595 -
Seca12g00611 134 PANTHER - 2 129 IPR007612 -
Seca12g00611 134 Pfam LURP-one-related 1 123 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00611 Seca-Chr12 5509977 5511309 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00611 - - gmx:100810645 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00611 12 5509977 5511309 Seca12g00611 12 5509977 5511309 ECH
Seca12g00611 12 5509977 5511309 Seca6g03697 6 104230707 104232183 PCT