Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03655 ATGGCCAGTGATCGTCTGACCCGTTCTCACTCTCTCCGAGAGAGGCTTGATGAAACTCTCGCTGGTAACAGGAATGAAATTTTGGCCCTTCTGTCAAGGATTGAAGCCAAGGGAAAGGGAATCCTGCAACACCATCAGGTCATTGCAGAGTTTGAAGAAATCCCTGAAGAGAATAGGCAAAAACTACTGAATGGGGCCTTTGGAGAAGTTTTGAGGTCTACCCAGGAAGCCATAGTGTTGCCACCTTTTGTTGCTCTGGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGAGAGTGGATGTGCACTCTCTTGTTGTTGATGAGCTTCAAGCTTCTGAGTATCTGCGTTTCAAGGAGGAGCTTGTTGAAGGAAGTGCTAATGGCAACTTCGTGCTTGAGTTGGACTTTGAGCCATTTAACGCATCCTTCCCTCGACCAACTCTTAACAAATCAATTGGAAATGGCGTTGAGTTCCTCAATCGCCATCTTTCTGCTAAGCTCTTCCATGACAAGGAGAGCATGCACCCATTGCTGGAATTCCTCAGGCTTCACAGCTATAAGGGAAAGACTATGATGTTGAATGACAGAATCCAAAACTTGAATTCTCTCCAACATGTTTTGAGAAAAGCAGAAGATTATCTGAGCACAATTCCTCCTCAAACACCCTACTCAGAATTTGAACACAAATTCCAAGAGATTGGTTTGGAGAGAGGTTGGGGTGACAATGCTGAGCGTGTCCTTGAAATGATTCAGCTTCTGTTGGATCTTCTTGAGGCACCTGACCCTTGCACCCTTGAGACATTCCTTGGAAGAATTCCTATGGTCTTTAATGTTGTTATCCTTTCTCCCCATGGTTACTTCGCTCAAGATAATGTCTTGGGATACCCTGACACTGGTGGACAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAATCGCATCAAAAAACAAGGCTTGGATATCACCCCTCGAATTCTCATTATCACTCGTCTTCTCCCTGATGCAGTAGGAACTACTTGTGGCCAACGTCTTGAGAAGGTGTTTGGTACTGAATATTGTCACATTCTTAGAGTTCCCTTTAGAACAGAGAAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCCTACCTGGAAACTTACACTGAGGATGTTGCCAATGAACTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTGGCACATAAACTAGGAGTTACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATATCCTGAGTCAGACATTTACTGGAAAAAATTTGAAGAGAAATATCACTTCTCATGCCAATTCACTGCTGATCTTTTTGCAATGAACCACACAGACTTTATTATCACCAGTACCTTCCAAGAGATTGCTGGAAGCAAGGATACTGTTGGACAGTATGAGAGTCACACTTCCTTCACTCTTCCAGGACTCTACCGTGTGGTTCATGGTATTGATGTGTTTGATCCAAAGTTCAACATTGTCTCTCCAGGAGCTGATATGAGCATTTACTTCCCATACACTGAAACTGAGCGTAGGTTGACATCATTCCATCCTGAGATTGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAGGAACACATTTGTGTATTGAAGGACCGCAACAAGCCAATTATCTTCACCATGGCAAGATTGGACCGTGTGAAGAACATTACAGGACTTGTTGAGTGGTATGGTAAGAATGCCAAACTAAGGGAGTTGGTGAACCTTGTTGTTGTTGCTGGAGATAGGAGGAAGGAGTCCAAGGACTTAGAAGAGAAAGCTGAGATGAAGAAGATGTATAGTCTAATTGAGACATACAAGTTGAATGGCCAATTCAGATGGATTTCCTCTCAGATGAATAGAGTGAGGAATGGGGAACTCTACCGTGTCATTTGTGACACAAAGGGTGCTTTTGTGCAGCCTGCTATTTATGAAGCTTTTGGTTTGACTGTTGTTGAGGCCATGACATGTGGGTTGCCAACATTTGCTACATGCAATGGTGGTCCTGCTGAGATCATTGTGAATGGAAAATCTGGATTCCATATTGACCCTTACCATGGTGACCGTGCTGCTGAAATCCTTGTTGATTTCTTTGAGAAGAGTAAGGCAGATCCATCTTACTGGGACAAAATCTCCCAGGGAGGTCTCAAGCGTATTCATGAGAAGTACACATGGCAAATTTACTCTGACAGGCTTTTGACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTCACCAACCTTGATCGCCGTGAGAGCAAACGTTACCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGTATATATCTTTCTTTATCTTCTCCTTTGA 2418 0.438 MASDRLTRSHSLRERLDETLAGNRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLLNGAFGEVLRSTQEAIVLPPFVALAVRPRPGVWEYLRVDVHSLVVDELQASEYLRFKEELVEGSANGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRLHSYKGKTMMLNDRIQNLNSLQHVLRKAEDYLSTIPPQTPYSEFEHKFQEIGLERGWGDNAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILIITRLLPDAVGTTCGQRLEKVFGTEYCHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVANELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTSFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTETERRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVNGKSGFHIDPYHGDRAAEILVDFFEKSKADPSYWDKISQGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYRKLVYIFLYLLL. 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03655 805 FunFam Sucrose synthase 280 547 - -
Seca6g03655 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Seca6g03655 805 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Seca6g03655 805 Gene3D - 25 145 - -
Seca6g03655 805 FunFam Sucrose synthase 11 145 - -
Seca6g03655 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
Seca6g03655 805 Gene3D - 146 275 - -
Seca6g03655 805 PANTHER - 7 797 IPR012820 GO:0005985|GO:0016157
Seca6g03655 805 FunFam Sucrose synthase 146 275 - -
Seca6g03655 805 Pfam Glycosyl transferases group 1 564 736 IPR001296 GO:0016757
Seca6g03655 805 NCBIfam sucrose synthase 24 796 IPR012820 GO:0005985|GO:0016157
Seca6g03655 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03655 Seca-Chr6 103781626 103787067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03655 6 797 Glycosyltransferase AT3G43190 85.732 0.0 1436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03655 K00695 - gmx:100819730 1498.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03655 6 103781626 103787067 Seca6g03655 6 103781626 103787067 ECH
Seca12g00568 12 5106724 5112330 Seca6g03655 6 103781626 103787067 PCT