Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03643 ATGGCTCATTTGTTAAGCTATGATCCTAGTTCCCATTTCAGGAGGGCCTTTTCCCAGTACCCTTCTCTTTCTTGTTCTGAGCTTAACAGAAGCATTGGGTTCACTCTCAAAGGTTGCTTTGATATCAGTGGCAATGGTAATGGTAATAGGGTCTTTCTGAAGGAAAAGACTAAACCCTCTGGTTTTGCATGTTTTCCTCGGCCACCCTTGTTAGCTGATTTAGAGAAGGGTGTTTCTCTCAAAAATGATGACTGTGATGCTACACTGATTAATGTTGAACATAGATCGCCAGGTGGAAGTCCCACTAAACCTTTTAGTCTCCCTGATCACCAATTTCCCCAGAAACTTGTTGTTGCTGTTGATGTTGATGAAGTATTAGGTAACTTTGTGTCAGCTCTGAACAAGTTCATAGCAGATCAATACTCATCAAATTATTCAGTTTCTGAATATCATGTGTACGAGTTCTTCAAGATATGGAACTGTTCACGCGATGAAGCTAATAATCGTGTTCACGAATTTTTCAAGACACCATACTTCAAGTCAGGAATTCACCCCATCCCAGGTGCTCAGATGGTCCTGCAGAAGTTATCAAGATTTTGTGACCTATCAGTTGTAACATCTCGGCAGAATGCAATCAAGGATCACACACTTGAATGGATAGAGAAGAATTTTTCAGGATTGTTTCAGGAGATTCACTTTGGTAACCACTTTGCTCTAGATGGGGTGTCAAGACCGAAGTCAGAGATTTGTAGGTCTATAAATGCTAAGGTTCTTATTGATGATAACCCGAGATATGCCATAGAGTGCGCTGAAGCTGGAATTAGAGTCCTACTTTTTGATTATGAAAACTCGTATCCTTGGTGCAAGACTGAGTTTGTTGAGGAGCATCCTCTAGTGATCAAAGTTAAGAACTGGGAAGAAGTTGAGCAGCATTTGATGTCATTGATAGCTTCCTAG 957 0.4075 MAHLLSYDPSSHFRRAFSQYPSLSCSELNRSIGFTLKGCFDISGNGNGNRVFLKEKTKPSGFACFPRPPLLADLEKGVSLKNDDCDATLINVEHRSPGGSPTKPFSLPDHQFPQKLVVAVDVDEVLGNFVSALNKFIADQYSSNYSVSEYHVYEFFKIWNCSRDEANNRVHEFFKTPYFKSGIHPIPGAQMVLQKLSRFCDLSVVTSRQNAIKDHTLEWIEKNFSGLFQEIHFGNHFALDGVSRPKSEICRSINAKVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTEFVEEHPLVIKVKNWEEVEQHLMSLIAS. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03643 318 SUPERFAMILY HAD-like 105 313 IPR036412 -
Seca6g03643 318 Gene3D - 137 315 IPR023214 -
Seca6g03643 318 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 116 311 IPR010708 GO:0008253|GO:0009264
Seca6g03643 318 PANTHER NUCLEOTIDASE YQFW-RELATED 28 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03643 Seca-Chr6 103668662 103672126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03643 - - aprc:113852922 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03643 6 103668662 103672126 Seca6g03643 6 103668662 103672126 ECH
Seca12g00554 12 4912549 4915389 Seca6g03643 6 103668662 103672126 PCT