Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03632 ATGGAAGAAGTTAATGTGGTGCAAACTAAGGATGGAACTGTTTCAGTAGCTTCTGCGTTTGCTGGCCATCAAGAAGCTATACAGGATAGAGACCACAAATTTTTAAGAAAAGCTGTTGGGGAAGCATACAAAGGGGTGGAATGTGAAGATGGAGGTCCTTTTGGTGCTATTATAGTTTGTAATGATGAAGTAATTGCTAGTTGTCACAACATGGTTCTGAGGAACACAGACCCAACTGCTCATGCAGAAGTAACAGTAATAAGAGAGGCTTGTAAGAAGCTAAAGCAGATAGAACTTTCTGATTGTGAAATATATGCTTCTTGTGAACCCTGTCCAATGTGTTTTGGTGCAATTCACCTTTCACGAGTTAAGAGGTTGGTTTATGGAGCAAAGGCTGAGGCAGCAATTGCTATTGGGTTCGATGATTTTATTGCAGATGCATTGCGAGGTACTGGATTCTATCAGAAAGCACAATTGGAGATTAAAAGAGCTGATGGCAATGAAGCCATCATTGCTGAAGAAGTTTTTGAGAAAACAAAGGAAAAATTCCGAATGTATTAA 561 0.3957 MEEVNVVQTKDGTVSVASAFAGHQEAIQDRDHKFLRKAVGEAYKGVECEDGGPFGAIIVCNDEVIASCHNMVLRNTDPTAHAEVTVIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEAIIAEEVFEKTKEKFRMY. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03632 186 Gene3D Cytidine Deaminase, domain 2 22 185 - -
Seca6g03632 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 23 133 - -
Seca6g03632 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
Seca6g03632 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Seca6g03632 186 Pfam MafB19-like deaminase 31 145 IPR028883 GO:0002100|GO:0008251
Seca6g03632 186 CDD nucleoside_deaminase 35 142 - -
Seca6g03632 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Seca6g03632 186 FunFam tRNA-specific adenosine deaminase 29 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03632 Seca-Chr6 103593140 103595882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03632 - - gmx:100500436 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00534 12 4735473 4738688 Seca6g03632 6 103593140 103595882 PCT