Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03628 ATGAAGCAAAATATGCCACCCCCACCACCACCACCATTATCACCACCAACAACAAAAACAACAAAAAGTGTGTTCAAGCTACCGAATAGTTTAATGCCATCACAATTGAGAGCTTCTTCAAAGTTCACAGACCCTCCAAAGACACCACCTGAGGTTGTCAATGGGGTAATGTCAGTATCATCAATGAGAGCCAAGTCTGTGACCCCGGATTTGAGGAACAACTCAAGGGCCAAAAGGGGTGTTGTGATGAACAAGGCCAAACCCAATGAGGAGGTTATGGGAACCCAAAAGTGTAGGGAAGCTGAAGAGGCTAAGGTTGTGGCTCGTTATGTGGGTCGTCATGCTGTGGAACAGTTTGCTCGACCTAGAAGAGGGGTTGGGGAATTGGTTTTGAAGAAGGATAGAGAGGACCCTGATGGGAAGAAGAAGGAATTGCTGGAGAAGCTTGAGGTGAGTGAGAGTTTGATCAAGAATCTGCAGTCTGAAGTGCTGGCATTGAAGCTTGAGTTGGATAAAGTTAAGAGCTTGAATGTGGAGCTTGAATCTCACAACAGGAAACTCACTCAGGATCTTGCTGCTGCGGAAGCTAAGGTGGTAAATGTTGGAGGCAGTGAAAAGATGAAGGAGTCAATTGTAGAACATCAGAGCCCTAAATTTAAACACATACAGAAACTCATTGCTGACAAATTGGAACGGTCCAAAGTGAAAAAGGAAGCCATTACTGATGGATGTTTTGTTAAAGTACCAATTCCAGCACCAATAGCAATCCATGCCATTCCTGATGCTACAACTACAAGGATAGGAAGAAAACCTACACCTAACTCATGCCTGCCTCCACCTCCACCTCCACCTCCTCCACCACCACCAATCCCTTCTAGGCCTCCAGCCAAAGCAACTAACACCCCAAAGGCCCCTGCATTTGTGAAATTATTTCATTCATTAAAGAATCAAGAAGGGGTGAAAGACACCAATGGATCAGTTAAACAGCAGAAACCAGTAGCTGTAAATGTACACAATAGCATTGTTGGAGAGATTCAAAACCGTTCAGCTCATCTTTTAGCAATAAGGGCAGATATTGAAACAAAAGGAGAGTTCATTAATGACCTTATAAAAAAGGTAGAAGAAGCAGCCTACATGGATATTGAAGATGTCTTAAATTTTGTGAATTGGCTTGATGGAAAACTCTCATCATTGGCTGATGAGCGTGCAGTGTTGAAGCATTTTAAATGGCCTGAGAAGAAAGCTGATGCCATGCGCGAAGCTGCAGTGGAGTATCGTGATCTTAAATTGTTAGAACAAGAGATTTCCTCATACAAGGATGATCCTAAAATACCATGTGGAGCTTCCTTGAGAAAAATGGCCAGCCTATTAGACAAGTCTGAGAGCAGCATACAGAGGTTGGTCAAGTTGCGAAATTCTATCATGCGCTCATATCAAGAGTACAAAATCCCTACTGCATGGATGCTTGATTCAGGAATGATGATGAAGATAAAGCAGGCTTCTATGAATTTGGTGAAGATGTACATGAAAAGAGTGACAATGGAGCTCGGATCTGCTCGGAACTCAGACAAACAATCAAGTCAAGAATCCCTTCTGCTTCAGGGGGTGCATTTTGCATATAGGGCTCATCAGTTTGCTGGAGGTCTAGATGCAGAAACATTGTGTGCTTTTGAAGAGATAAGGCAACGTGTACCAGGACACATAGCAGGGTCTCGAGAACTTTTGGCAGCGGGCATAGCATCATCATGA 1749 0.4357 MKQNMPPPPPPPLSPPTTKTTKSVFKLPNSLMPSQLRASSKFTDPPKTPPEVVNGVMSVSSMRAKSVTPDLRNNSRAKRGVVMNKAKPNEEVMGTQKCREAEEAKVVARYVGRHAVEQFARPRRGVGELVLKKDREDPDGKKKELLEKLEVSESLIKNLQSEVLALKLELDKVKSLNVELESHNRKLTQDLAAAEAKVVNVGGSEKMKESIVEHQSPKFKHIQKLIADKLERSKVKKEAITDGCFVKVPIPAPIAIHAIPDATTTRIGRKPTPNSCLPPPPPPPPPPPPIPSRPPAKATNTPKAPAFVKLFHSLKNQEGVKDTNGSVKQQKPVAVNVHNSIVGEIQNRSAHLLAIRADIETKGEFINDLIKKVEEAAYMDIEDVLNFVNWLDGKLSSLADERAVLKHFKWPEKKADAMREAAVEYRDLKLLEQEISSYKDDPKIPCGASLRKMASLLDKSESSIQRLVKLRNSIMRSYQEYKIPTAWMLDSGMMMKIKQASMNLVKMYMKRVTMELGSARNSDKQSSQESLLLQGVHFAYRAHQFAGGLDAETLCAFEEIRQRVPGHIAGSRELLAAGIASS. 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03628 582 Coils Coil 142 197 - -
Seca6g03628 582 MobiDBLite consensus disorder prediction 1 17 - -
Seca6g03628 582 MobiDBLite consensus disorder prediction 18 42 - -
Seca6g03628 582 MobiDBLite consensus disorder prediction 59 73 - -
Seca6g03628 582 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 7 566 IPR040265 -
Seca6g03628 582 MobiDBLite consensus disorder prediction 259 301 - -
Seca6g03628 582 MobiDBLite consensus disorder prediction 273 298 - -
Seca6g03628 582 MobiDBLite consensus disorder prediction 1 94 - -
Seca6g03628 582 Coils Coil 414 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03628 Seca-Chr6 103564556 103568438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03628 - - gmx:100820086 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03628 6 103564556 103568438 Seca6g03628 6 103564556 103568438 ECH
Seca12g00518 12 4636336 4640486 Seca6g03628 6 103564556 103568438 PCT