Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03627 ATGTTTGGGGCAAAGTTTTCTCTTCACGTCGACGTAGTGGCACCCACCAACTGCTTCAGAAACGAACACAGTTCCCATAAGAACGCCCCCTTCTCTATGGAACAACTCGGAAGAAAAGCTTCAACGCTTTGTCTCAGCTCTGTGGACCCCAAACCACCCAACGACGCCGTTTTCTTTGTCACACCCCCCAACAAGTGCGGCGTCGACTATCTTGGAGAGAGCACTAAGGGGGACTTGAACGTTAAGTTGGACCATCTTCACGCTTTTGGAATTGATGGTCATGCTATTTTAGAAGGTCCGGTTGAGGAGGTGGCTAGAACAAAGGCTAGAGAAGCTGAAGATTTACTGAAAGACTTGAATATTCCGAGTCCTTCTTCAACAAGAAATTCACCTCGTGGAATATTCTGCACCCGTACATTGAATTTGCGGTCAATTAGTGCCATTGGATATGACATGGACTATACCTTGATGCATTATAATGTGATGGCTTGGGAAGGGCGAGCATATGACTACTGCATGGAAAACCTGAAGAATATGGGTTTCCCTGTTGATGGACTTGCATTTGATCCAGATCTGGTTATTAGAGGCCTTGTCATAGACAAAGAGAAAGGCAACTTGGTTAAAGCTGATCGTTTTGGTTATGTGAAAAGAGCCATGCATGGAACCAAAATGTTATCTACCCGTGCTGTGAGTGAGATGTATGGGAGAGAACTGGTGGATCTACGGCAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTCTCTCTGTCTGAAGCTGTGGCCTACATGCAGATGGTCGACAGATTGGATGATGGGGCTATACCATCAGATCTTGGTTCCTTTGATTATAAAGGGCTTTATAAGGCTGTTGGAAAAGCTCTCTTCAGGGCACATGTAGAAGGTCGCCTCAAGAGTGAGATTATGTCTAACCCTGAACAGTTTGTGGAGCCTGATCCAGAATTACCCTTGGCACTTTTGGATCAGAAGGAGGCTGGCAAAAAACTTCTGCTTATTACCAACTCAGATTATCATTATACAGACAAAATGATGCAGCATTCATTTAATAGATTCCTTCCCAATGATATGGGTTGGCGAGATTTATTTGATATTGTAATTGTCTCAGCACAGAAACCAGAATTCTTCCAAATGTCACACCCTATGTATGAAGTGGTGACAGGGGAGGGTCTGATGCGTCCATGCTTCAAGGCTCAAACTGGTGGATTGTACTCAGGGGGAAGTGCACAAATGGTTGAAGATTCCCTAAATATACATGGAGATGAGATATTGTATATTGGTGACCATATTTACACCGATGTCAGTCAATCCAAAGTCCATTTGCGATGGCGCACAGCATTGATTTGTCGGGAACTGGAAGAAGAGTACAGTGCCCTAATTCATAGCCAGAGTCATAGACAATCATTGGTGGAACATATAAATCAAAAGGAGGTTGTAGGTGATCTCTTTAATCAACTACGGCTGGCTCTGCAGAGACGAAGTAAAGGGCATCCTGCTCAAACCCTTGCTGCAACTAACATGGACGAAGAAAACCTTACTGAAAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTAGATGAGAAGATTGCTCCAATGCTAGAGGCTGATGGGGAACTCTTCAATAAAAGGTGGGGTTTTCTATCTCGTGCTGGCTTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAGTATGCTGATATATATACCTCTAGGGTGTCAAACTTTTTATATTATACACCCTTTATGTATTTCCGCTCTCAGGAACAGAACCTTGCACATGATTCATAG 1809 0.4356 MFGAKFSLHVDVVAPTNCFRNEHSSHKNAPFSMEQLGRKASTLCLSSVDPKPPNDAVFFVTPPNKCGVDYLGESTKGDLNVKLDHLHAFGIDGHAILEGPVEEVARTKAREAEDLLKDLNIPSPSSTRNSPRGIFCTRTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMENLKNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYVKRAMHGTKMLSTRAVSEMYGRELVDLRQESRWEFLNTLFSLSEAVAYMQMVDRLDDGAIPSDLGSFDYKGLYKAVGKALFRAHVEGRLKSEIMSNPEQFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFDIVIVSAQKPEFFQMSHPMYEVVTGEGLMRPCFKAQTGGLYSGGSAQMVEDSLNIHGDEILYIGDHIYTDVSQSKVHLRWRTALICRELEEEYSALIHSQSHRQSLVEHINQKEVVGDLFNQLRLALQRRSKGHPAQTLAATNMDEENLTESMQKLLIVMQRLDEKIAPMLEADGELFNKRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDS. 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03627 602 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 125 601 IPR008380 -
Seca6g03627 602 FunFam Haloacid dehalogenase hydrolase 293 484 - -
Seca6g03627 602 Gene3D - 296 483 IPR023214 -
Seca6g03627 602 CDD HAD_cN-II 135 457 - -
Seca6g03627 602 NCBIfam HAD-IG family 5'-nucleotidase 134 474 IPR008380 -
Seca6g03627 602 SUPERFAMILY HAD-like 131 602 IPR036412 -
Seca6g03627 602 Coils Coil 514 534 - -
Seca6g03627 602 Pfam 5' nucleotidase family 134 602 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03627 Seca-Chr6 103546067 103557275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03627 - - gmx:100800826 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00511 12 4556153 4563483 Seca6g03627 6 103546067 103557275 PCT