Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03355 ATGCAGGTTTTCTTCTCTGCTAATGCTGCTGCCTTGGCTTCAAGGAAGTCCTCCCCGAGGGTGACAAATGAGGCTGTCCAAAAGGCTGCTGCTGCTCTGAAGGGCTCTGATCACCGGAGGGCCACCGATGTCAGTGCCAGGTTGGATGCTCAACAGAAGAAACTGAACCTCCCCATTCTTCCAACCACTACAATTGGATCTTTCCCTCAGACTGCAGACCTTAGAAGGGTTCGTCGTGAATTCAAGGCCAACAAGATCTCCGAGGAAGATTATATCCGTTTCATTAAGGAGGAAATTAACAATGTTGTGAAGATCCAAGAAGAACTTGACATTGATGTCTTGGTGCATGGAGAGCCTGAGAGGAATGACATGGTGGAGTACTTTGGAGAACAATTATCCGGCTTTGCTTTCACTGCCAATGGGTGGGTGCAATCATATGGATCCCGCTGTGTCAAACCACCCATCATCTATGGTGATGTGAGCCGTCCCAAGCCCATGACTGTCTTCTGGTCTTCAACAGCTCAAAGTATGACCAAACGGCCAATGAAGGGAATGCTTACCGGCCCTGTTACTATTCTGAACTGGTCCTTTGTAAGAGATGACCAGCCCAGATTTGAAACCTGCTACCAGATTGCTTTGGCTATCAAGGATGAAGTTGAGGATCTTGAGAAAGCCGGTATCACTGTCATCCAGATTGATGAGGCTGCTTTAAGAGAAGGTTTGCCATTAAGGAAGTCTGAGGAGGCTTTCTATCTAAACTGGGCAGTTCACTCATTTAGGATTACCAACTGTGGTGTGCAGGACACTACCCAGATTCACACTCACATGTGCTACTCAAATTTCAATGACATCATTCAGTCAATCATAGATATGGATGCTGATGTGATCACCATTGAGAACTCAAGATCAGATGAGAAGTTACTTTCAGTCTTCCGCGAGGGAGTTAAATATGGTGCTGGCATTGGTCCTGGTGTATATGATATTCACTCACCAAGGATCCCACCCACAGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCAGTTCTTGAAAGCAACATTCTCTGGGTGAACCCAGATTGTGGTCTCAAGACACGCAAATACACTGAGGTTAAGCCTGCTCTCACTAACATGGTTGCTGCTGCCAAACTCATTCGCAACCAGCTAGCTAGTGCCAAGTGA 1182 0.4645 MQVFFSANAAALASRKSSPRVTNEAVQKAAAALKGSDHRRATDVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREFKANKISEEDYIRFIKEEINNVVKIQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSMTKRPMKGMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEEAFYLNWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIQSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNQLASAK. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03355 393 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 18 386 - -
Seca6g03355 393 CDD CIMS_C_terminal_like 61 384 IPR002629 GO:0003871|GO:0008270|GO:0009086
Seca6g03355 393 Pfam Cobalamin-independent synthase, Catalytic domain 60 383 IPR002629 GO:0003871|GO:0008270|GO:0009086
Seca6g03355 393 Gene3D - 18 393 IPR038071 -
Seca6g03355 393 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 3 393 - -
Seca6g03355 393 SUPERFAMILY UROD/MetE-like 25 388 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03355 Seca-Chr6 100621598 100623553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03355 K00549 - gmx:100779947 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02183 10 25023309 25028454 Seca6g03355 6 100621598 100623553 PCT