Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02981 ATGTGGAATCCACGCGCTGTTTCCTGTGCTCTCCCTCCGTTGTTCCTGCTTCTTCTTCTTCTTCATTCTGTGCTACTGCTACCTCTAGTCTCTGCTCAGGGATCCAACAGAACCGCGTGGAACACTCTCAGTGGAAGTCCACCATTGGTCATAGCACGTGGTGGGTTTTCAGGGATATTTCCTGATTCTAGTAGTTATGCCTATTCGTTCGCTGCAGAAACTAGTTTAAATGATCTCTTTGTATGGTGTGATGTGCAATTAATGAAAGATGGGGTTGGGATTTGCTTTCCAGATATCAACCTTGCAAATGCTACTGACATTGCAGCTGAATATAGCATTTTAAAAAATACAAGTAATAATTACTTAGTTAATGGTTTACCAACCAGCGGATATTTTACTGTGGATTACACCCTGAAGGAGCTATCCGATTCCAATGTCATATTGTCTCAGGGAGTATACTCTCGAACAATTAAGTTTGATGGCAATTTTTTTCCAATTCTTACCATTGATGACTTGGTTAAACTTAAAATGGTAGCCCCACCAGGCTTGTGGTTGAATATTCAGCATGATGCATTCTACGCACAACACAATTTAAGTATGAGAAACTTTGTACTTTCTGTTTCTAGAAGAGTAATTGTCAGTTATATCTCATCCCCTGAAGCTGGTTTCCTGAGAAGTATAAGAGCACGCTTCAACCCAAAAACAACAAAACTAGTCTTCAGATTTCTGAGACAAGATGAAGTAGACCCATCAATCAATCAGACTTATGGTTCACTCTTAAAAAATCTAACATTTATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAAGGATACATATGGCCTGTAGATGCAAATCTTTATCTACTACCACATACGACTCTGGTCTCTGATGCACACAAAGTGGGGCTGGAAGTCTTTGCATCGGATTTTGTGAATGATGTTCCATTTAGCTTTAATTACAGTTATGACCCTCTTGCTGAGTACCTCCAATTCATTGACAATGGAAACTTCTCTGTAGATGGTGTATTGTCTGACTTCCCCATAACGCCATCTGCAGCTATAGACTGCTTTGCTCACACAGGCACCGATGCTCCAAAGGTTTCAGTTAACACTTTGGTCATTTCAAAATATGGAGCAAGTGGAGATTATCCTGCCTGTACTGACTTAGCATATGAGAAAGCTATATCAGATGGTGCGGATGTTCTTGACTGTCCTGTTCAAATGTCCAAGGATGGAATACCATTTTGCTTAAGCTCAATTGATCTTATAGAGAGCACAAATGTCGCTCAATCAAGTTTCAGCAAACTTGCCACAACTATTCCAGAAATCAAATCTGACAGCGGCATATTTGCATTCAACTTGGCATGGGATGATATAAAAGGCCTGACCTCCTCAATGTTAAGCCCTTATTATTCTAAATACAAATTGCGTAGGAACCCAAAATATGACAAGAGTGGGAAATTTGTAACGTTGTCAGATTTCTTGAACTTGACAAAAAATAAGACTTCCCTATCAGGTGTTGTGATCATCATCGAGAATGCGGCCTATCTTGCAAGCAAACAAAATTTAAGTGTGATTGATGCAGTAATTGATACTTTGAGCAAAGCAGGTTATGATAAACCAGGGGCTCAAAAGGTTATGATTCAATCTACCAATAGTTCTGTACTGCTGAAATTTAAGGAGAAAACTAATTATGAGCTTGTCTACAAGATTGACGAGATAGTTGGTGATGTTGAGGATTCAGCTGTTAGGGATATCAAAAGCTTTGCTGATTCTGTGGTTGTCACAAAGACCTCTGTATACCCTGTTAGTGAATTATTTCTGACCGTGCCTACAAAGATTGTGTCAAAGCTCAAATCTTCTAACCTCTCTGTTTATACAGAAACTTTCAGCAATGAGTTTATATCCCAGGCATGGGATTTCTTCTCAGATGCAACTGTGGAGATCAACACATTTGTTCAAGAAGGAATTGATGGTGTCATCACAGACTTCCCCAAAACAGCTAATAGATATAGAAGGAACAGATGCTTAAATTTAGGTAACGACGCACCTCCTTACATGAAACCTGTTGAAGTAGGTGGTCTTTTACAAGCCATGGCTAAACCTGACTTGCCACCAGCTCAGGCTCCAATCCCTCCCCTGACTGAATCTGAAGTGACAGAACCACCTTTCCCTCCTCCTTCTAAAAGAGCTCCATCTTCTAGCCCTGTTGCTGGAACTGGACCACCAGCACAACCACCAGGAAATGCAAAGGCTAAGGTCACTGTCTGCTTCTTTTTGCCTAGTCTGACTCTGCTTGTAGCTTCTCTTCTGCTTTGA 2322 0.4053 MWNPRAVSCALPPLFLLLLLLHSVLLLPLVSAQGSNRTAWNTLSGSPPLVIARGGFSGIFPDSSSYAYSFAAETSLNDLFVWCDVQLMKDGVGICFPDINLANATDIAAEYSILKNTSNNYLVNGLPTSGYFTVDYTLKELSDSNVILSQGVYSRTIKFDGNFFPILTIDDLVKLKMVAPPGLWLNIQHDAFYAQHNLSMRNFVLSVSRRVIVSYISSPEAGFLRSIRARFNPKTTKLVFRFLRQDEVDPSINQTYGSLLKNLTFIKTFASGILVPKGYIWPVDANLYLLPHTTLVSDAHKVGLEVFASDFVNDVPFSFNYSYDPLAEYLQFIDNGNFSVDGVLSDFPITPSAAIDCFAHTGTDAPKVSVNTLVISKYGASGDYPACTDLAYEKAISDGADVLDCPVQMSKDGIPFCLSSIDLIESTNVAQSSFSKLATTIPEIKSDSGIFAFNLAWDDIKGLTSSMLSPYYSKYKLRRNPKYDKSGKFVTLSDFLNLTKNKTSLSGVVIIIENAAYLASKQNLSVIDAVIDTLSKAGYDKPGAQKVMIQSTNSSVLLKFKEKTNYELVYKIDEIVGDVEDSAVRDIKSFADSVVVTKTSVYPVSELFLTVPTKIVSKLKSSNLSVYTETFSNEFISQAWDFFSDATVEINTFVQEGIDGVITDFPKTANRYRRNRCLNLGNDAPPYMKPVEVGGLLQAMAKPDLPPAQAPIPPLTESEVTEPPFPPPSKRAPSSSPVAGTGPPAQPPGNAKAKVTVCFFLPSLTLLVASLLL. 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02981 773 MobiDBLite consensus disorder prediction 706 733 - -
Seca6g02981 773 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 19 761 - -
Seca6g02981 773 MobiDBLite consensus disorder prediction 706 750 - -
Seca6g02981 773 Pfam Glycerophosphoryl diester phosphodiesterase family 379 668 IPR030395 GO:0006629|GO:0008081
Seca6g02981 773 Pfam Glycerophosphoryl diester phosphodiesterase family 80 348 IPR030395 GO:0006629|GO:0008081
Seca6g02981 773 ProSiteProfiles GP-PDE domain profile. 48 355 IPR030395 GO:0006629|GO:0008081
Seca6g02981 773 CDD GDPD_SHV3_repeat_1 48 354 - -
Seca6g02981 773 SUPERFAMILY PLC-like phosphodiesterases 47 353 IPR017946 GO:0006629|GO:0008081
Seca6g02981 773 Gene3D Phosphatidylinositol (PI) phosphodiesterase 47 353 IPR017946 GO:0006629|GO:0008081
Seca6g02981 773 Gene3D Phosphatidylinositol (PI) phosphodiesterase 371 672 IPR017946 GO:0006629|GO:0008081
Seca6g02981 773 ProSiteProfiles GP-PDE domain profile. 372 673 IPR030395 GO:0006629|GO:0008081
Seca6g02981 773 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 370 673 - -
Seca6g02981 773 CDD GDPD_SHV3_repeat_2 373 672 - -
Seca6g02981 773 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 46 354 - -
Seca6g02981 773 SUPERFAMILY PLC-like phosphodiesterases 372 673 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02981 Seca-Chr6 95803338 95813010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02981 19 773 Receptor kinase-like Gene Family AT4G26690 54.843 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02981 - - gmx:100814941 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02982 6 95821979 95828665 Seca6g02981 6 95803338 95813010 PCT