Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02286 ATGAGGTTCATAAACTCTAATATGAATCGCTACATGGAAAGTATAAAGAGAGAACATGAGCAGATCACTAAGGAAAATGAACAGTTCAGTGACAGAATAGTTCAGCTAGAAAAACAACTGAAAAGCAAACAAAAACTGGAATCAGAGAATCAGAAACTTAAAGGGAAATTAGATGTCATGAAGCACATGGAAGATGAATTTCTGAAGATGGTGGGTACTTTACATATGAACATAACGGAAAAGGAACAATTACTTAAAGAATCAGAAGATTTTAACCAATCACTAATCAATAAAGAGCGTGAGAGCAATGTTGAGCTTCAGAAAGCTCGAAAAAGAATGATTGAGGGCGTTGCCGAAAGAATAAGTCGTTTTGTGAATATTGGTGTCAAAAGAATGGGGCTAGTTGATCCTAGGCCATTTCTTAAAGCTATGAGGGCCAAGAAGACATATGATAAGGAGGAAGCAACGCAGAAAGCTTTAGAAATGTGTTCAAAGTGGGAAAAGTACGTGGAGGACCCCCATTGGTATCCATTCAAAATAATCACAGTTAATGGGAGATCAAAGGAAATCATAGATGATGAAGATGAAAAGCTGAAAAGTGTGAAAAGGGAGGTGGGTATGGGGGCATACAGAGCAGTGGTGGTAGCTTTAAAAGAAATGAATGAATATAATGCAAGTGGGAGATATGTAATCTCGGAGCTGTGGAACTACAGAGAGGGAAAGAGAGCCAGTTTGGAAGAAGGAGTTGAATTTTTATTGGGTAAATGGAAAACCAAAAAACAGAAAATACATCAAATGGTGACACAACATCAGGAACAAGAGCCGCCTACTAGTACTACTACTAAATGTTAG 852 0.3779 MRFINSNMNRYMESIKREHEQITKENEQFSDRIVQLEKQLKSKQKLESENQKLKGKLDVMKHMEDEFLKMVGTLHMNITEKEQLLKESEDFNQSLINKERESNVELQKARKRMIEGVAERISRFVNIGVKRMGLVDPRPFLKAMRAKKTYDKEEATQKALEMCSKWEKYVEDPHWYPFKIITVNGRSKEIIDDEDEKLKSVKREVGMGAYRAVVVALKEMNEYNASGRYVISELWNYREGKRASLEEGVEFLLGKWKTKKQKIHQMVTQHQEQEPPTSTTTKC. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02286 283 Pfam XH domain 130 262 IPR005379 -
Seca6g02286 283 Coils Coil 81 112 - -
Seca6g02286 283 PANTHER RIBONUCLEASE P SUBUNIT P38 12 262 IPR045177 GO:0080188
Seca6g02286 283 Coils Coil 8 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02286 Seca-Chr6 84231039 84232999 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02286 - - ccaj:109816717 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02286 6 84231039 84232999 Seca6g02286 6 84231039 84232999 ECH
Seca8g01065 8 15389501 15396623 Seca6g02286 6 84231039 84232999 PCT