Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02256 ATGACGACTAACTTGGAATCTACATACCATCTATGCCAACTTGCATATTCTCTTCTTAAAGCATCTGGAAATGGAAGCATTGTGTTCATTTCCTCTGTTGCATCTCTGACACACATAGGCTCTGGAACCATTTATGCAGCAACTAAAGCTGCAATCAATCAGCTTACCAAAAATCTTGCTTGTGAGTGGGCTAAAGACAATATAAGGAGCAACTGTGTTGCACCCTGGTATACAAAAACACCGCTTGTGGAACCTTTGCTTGCTAACAAAGAGTTAATGAATGAGATAATATCTCGTACACCGATAAAGCGGATAGCAGAAACACATGAAGTGTCATCTTTGGTGACTTTCCTTTGCCTTCCAGCTGCTTCCTACATCACTGGACAGGTTATTTCTGTTGATGGAGGATTTACTGTGAATGGATTTCAACCCAGCATGTTAATTAATTAG 450 0.4022 MTTNLESTYHLCQLAYSLLKASGNGSIVFISSVASLTHIGSGTIYAATKAAINQLTKNLACEWAKDNIRSNCVAPWYTKTPLVEPLLANKELMNEIISRTPIKRIAETHEVSSLVTFLCLPAASYITGQVISVDGGFTVNGFQPSMLIN. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02256 149 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 140 IPR036291 -
Seca6g02256 149 Pfam Enoyl-(Acyl carrier protein) reductase 1 138 - -
Seca6g02256 149 Gene3D - 1 149 - -
Seca6g02256 149 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 32 60 IPR020904 GO:0016491
Seca6g02256 149 PRINTS Glucose/ribitol dehydrogenase family signature 19 35 IPR002347 -
Seca6g02256 149 PRINTS Glucose/ribitol dehydrogenase family signature 66 83 IPR002347 -
Seca6g02256 149 PRINTS Glucose/ribitol dehydrogenase family signature 45 64 IPR002347 -
Seca6g02256 149 PRINTS Glucose/ribitol dehydrogenase family signature 101 121 IPR002347 -
Seca6g02256 149 PANTHER TROPINONE REDUCTASE 1 141 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02256 Seca-Chr6 83559658 83563949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02256 1 144 Miscellaneous Gene Families AT2G29290 62.329 9.52e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02256 K08081 - gmx:100819646 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02247 6 83410189 83421860 Seca6g02256 6 83559658 83563949 ECH
Seca6g02256 6 83559658 83563949 Seca6g02256 6 83559658 83563949 ECH