Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02250 ATGAATCATGGTCGCTTGGAACCTTGTCATGGCCTACTTAAAGTATCCAGATTCCCTTTTATCCCAGAAAAACTGAGTGATAAAGTTACAATCTTAATAAGGATTGGTATACTTGTGTGCCTTGTAGCATCCATATCACTTGCTCTCCACTCAGCCTTCTCTAAACCAGACCGGTGGTTCCCATTACCAGAGCATTTACATGGCTTGCAGAATGCTTCAGTCATTGTCATTGACAATGGACCCACAAACATTTCACACATTCTATTCGGCATTGGTGGTTCAGCAAAAACATGGCATGACCGTAGCAGCTACAGTAAGCTATGGTGGAATCCAAACACCACCAGGGGATTTGTTTGGCTTGACAAGAAACGTGGTCTTGTGCACCGTGACATGATAGTACCATATCAAATCTCACAGGGATGGACTCAGTTCAGGCACTTGCACTCAGCATCTGCAGTTAGGATAGCAAGGATAGTATATGAGAGCTTTAAACTTGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGATGATGATACGGTGTTTTTCCCTGAGAACTTAGTTACAGTATTGGGAAAATATGATCACAATCAAATGTATTATATTGGTGGGAATTCTGAGAGTGTGGAGCAAGATGTGATGCATTCCTTTAACATGGCTTTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAGCTCAACTAGCCAAAATAATGGATGGATGTCTTCATAGATACTTCTATTTTTATGGTTCTGATCAAAGGGTCTGGGCCTGTGTGAATGAAATAGGGGTTCCTCTTACCAAAGAAAGTGGATTCCACCAGCTTGACATACAAGGGAGTCCATATGGTCTTTTAGCAGCGCACCCCTTGGCACCACTTGTATCACTCCATCACCTTGGTCTATTGAATCCATTGTTCCCCAATCAGACTCAAATTGATTCATTAAAAAAGCTCATCAGTGCATACCACCTAGATCCTGCACGTATTTTGCAGCAAAGTATTTGCTATGATCATAACCGTAGATGGTCAATATCTATTTCATGGGGTTACACAGTACAAATCTATACAACATTGTTGATAGCAGCAGATTTACAGATGCCATTGCAGACATTTCGAACATGGAGAAGTGCAAGTGATGGTCCCTTCACATTTAATACTAGACCTATGAGCCCTGACCCATGCCAGCAGCCAGCTATATTTTTCCTGGACCAGGTTACAAAGGTAGGCACAAGTGGAAGTATCACTATCTACAAGAAATATGTAGACGAAGCAAAAAAATGCAAGAGAGCAGATAATACTGCAGGAGTGCAGAGAATTAAAGTTTCTGCCTTGAAGCTGGACCCAGAATATTGGAAGAATCAGGTACCACGTAGGCAGTGCTGCCAATTTATGGATGGTGGAAGCATAAAGGATAGCAGTGTGCATATCAGAATTAGGAAGTGCAGACCTCAAGAAACAATTACTATTTAG 1476 0.4167 MNHGRLEPCHGLLKVSRFPFIPEKLSDKVTILIRIGILVCLVASISLALHSAFSKPDRWFPLPEHLHGLQNASVIVIDNGPTNISHILFGIGGSAKTWHDRSSYSKLWWNPNTTRGFVWLDKKRGLVHRDMIVPYQISQGWTQFRHLHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFPENLVTVLGKYDHNQMYYIGGNSESVEQDVMHSFNMAFGGGGFAISYALAAQLAKIMDGCLHRYFYFYGSDQRVWACVNEIGVPLTKESGFHQLDIQGSPYGLLAAHPLAPLVSLHHLGLLNPLFPNQTQIDSLKKLISAYHLDPARILQQSICYDHNRRWSISISWGYTVQIYTTLLIAADLQMPLQTFRTWRSASDGPFTFNTRPMSPDPCQQPAIFFLDQVTKVGTSGSITIYKKYVDEAKKCKRADNTAGVQRIKVSALKLDPEYWKNQVPRRQCCQFMDGGSIKDSSVHIRIRKCRPQETITI. 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02250 491 PANTHER FRINGE-RELATED 25 489 - -
Seca6g02250 491 Pfam Protein of unknown function, DUF604 211 463 IPR006740 -
Seca6g02250 491 Gene3D - 77 343 - -
Seca6g02250 491 FunFam Fringe-related protein-like 76 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02250 Seca-Chr6 83453704 83458558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02250 10 489 Glycosyltransferase AT3G11420 55.912 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02250 - - gmx:100802549 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02250 6 83453704 83458558 Seca6g02250 6 83453704 83458558 ECH
Seca6g02250 6 83453704 83458558 Seca2g01818 2 35476067 35479993 ECH