Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01818 ATGCGCACCTCCATCACCATCAAACAAGAACCTACCAACATCTCCCACATCTTCTTCGGCATCGCCAGCTCCACCAAGACCTGGCCGAAGCGCCGCCCCTACGTCGACCTCTGGTGGCAGCCAAACGTCACCCGAGGCTTCCTTTGGATGGACGAAAAGCCATCAGAAAACGAGACCTGGCCGGAGAACTCGCCGCCGTTCAGAGTCTCCGGCAACACCTCATCTTTCAAGTACACCTGCACGTACGGTTCCCGGTCAGCTATTCGCATAGCACGCATAGTGAAAGAGACCTTCGAGCTAGGACTGCACAACGTTAGGTGGTTCGTGATGGGTGACGATGACACCGTGTTCTTCACCGACAACCTCGTTACGGTGTTGTCCAAATATGATCACAACCAAATGTATTATGTTGGCGCGAACTCGGAGAGTGTGGAACAGGATGTCATATTCTCTTACGCCGTGGCATATGGCGGCGGAGGGTTCGCCGTTACCTACCCTTTGGCGGTGGAGCTGGCGAGGATTTTGGACGGTTGCATAGACCGTTATGCCCAACTCTACGGTGGTGATCAGAAGGTTCAAGCTTGCATCAGTGAGATTGGTGTGCCATTAACTAAAGAACCTGGCTTTCATCAGGTTGATATACGTGGAAATCCGTTTGGGTTTTTAGTAGCACACCCGGTGGCGCCGCTGGTGTCACTACACCACTTGGAAACGGTGGATCAATTGTTTCCAAACCTGCCTAAGTTTGAGTCCATTAGCAAGTTGGTTGGGGCATATAAGATGGATCCGGGTCGGATCTTGGAGCACAGTTTCTGTTATGACTTAAAACGGAATTGGTCGGTTTCGGTGTCGTGGGGTTACAGCGTGCAGTTATATTTGTCGTTGTTGACAGCAAAGGAGTTGGAAAGGGCGGTTGGAACGTTCCAGACGTTTGGGAGCTTGAGCGACGGGCCGTTTGTGTTCAACACCCGACCCGTGAGCAGCGACCCGTGTGGGAGGCCCGTTTTGTTTTTCTTGGATCGGGTTGAGAACGTGGGTGCGGTCCAGACCCGATCCACGTACACAAGGTACGGTGACGCATTGGGGAAAGAATGTGGAAGACTTGACTTGGTTGGGGTCCTGGATGTTATTCAGTCCGTCAATGTCTCTGCACCTTACTTTACGCCAAACTTGTGGAAAAAGGCACAGCGTAGACAATGTTGTGAGATAATCAATGGCATTGAAGGGGTCAACAACGTGGTCCAAATCAAAATCAGAGGCTGCCATCACTTTGAAAGTGTGACTCCTCCCTAG 1293 0.5166 MRTSITIKQEPTNISHIFFGIASSTKTWPKRRPYVDLWWQPNVTRGFLWMDEKPSENETWPENSPPFRVSGNTSSFKYTCTYGSRSAIRIARIVKETFELGLHNVRWFVMGDDDTVFFTDNLVTVLSKYDHNQMYYVGANSESVEQDVIFSYAVAYGGGGFAVTYPLAVELARILDGCIDRYAQLYGGDQKVQACISEIGVPLTKEPGFHQVDIRGNPFGFLVAHPVAPLVSLHHLETVDQLFPNLPKFESISKLVGAYKMDPGRILEHSFCYDLKRNWSVSVSWGYSVQLYLSLLTAKELERAVGTFQTFGSLSDGPFVFNTRPVSSDPCGRPVLFFLDRVENVGAVQTRSTYTRYGDALGKECGRLDLVGVLDVIQSVNVSAPYFTPNLWKKAQRRQCCEIINGIEGVNNVVQIKIRGCHHFESVTPP. 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01818 430 PANTHER FRINGE-RELATED 8 425 - -
Seca2g01818 430 FunFam Fringe-related protein-like 4 260 - -
Seca2g01818 430 Pfam Protein of unknown function, DUF604 146 401 IPR006740 -
Seca2g01818 430 Gene3D - 4 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01818 Seca-Chr2 35476067 35479993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01818 10 429 Glycosyltransferase AT2G37730 61.283 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01818 - - qsu:112022386 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01818 2 35476067 35479993 Seca2g01818 2 35476067 35479993 ECH
Seca6g02250 6 83453704 83458558 Seca2g01818 2 35476067 35479993 ECH