Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02232 ATGGAGAACGTAGATCCTTGTAGAGATTTCATCAAAGACGTTAAGCGCATCATCATCAAGGTTGGGACTGCTGTGGTCACCCGTCAAGATGGAAGAGTAGCGGTTGGAAAATTAGGGGCACTCTGTGAGCAGATTAAGGAGTTGAACTCTCTGGGTTATGAGATTATTTTGGTGTCATCAGGTGCTGTTGGCCTTGGTCGCCAAAGGCTCAGATACAGAAAATTAATTAACAGCAGCTTTGCTGACCTTCAGAAGCCACAAGTTGAACTTGATGGCAAAGCTTGTGCTGCTGTTGGACAAAGCAGCCTTATGGCTCTTTATGATACCTTGTTTAGTCAGCTGGATGTGACATCTGCCCAGCTTCTTGTGACGGACAATGATTTTAGGGACAAAGATTTCAGAAAGCAACTCACCGAAACTGTGAAATCACTGTTAGCACTAAAAGTTATTCCTGTATTTAATGAGAATGATGCTGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGCATATTTTGGGATAATGACAGTTTATCAGCTTTATTGGCCTTGGAATTAAAAGCTGATCTTCTTATTTTATTGAGTGATGTAGAGGGTCTTTATAGTGGCCCCCCAAGTGACCCACGTTCAAAGCTTATTCATACATACATAAAGGAAAAGCATCAAAATGAAATTACTTTTGGAGATAAATCTAGGGTGGGAAGAGGTGGAATGACTGCCAAAGTAAAAGCTTCTATTCATGCAGCTGAAGCTGGCATTCCTGTTATCATTACCAGTGGTTGTGCAGCTGAAAATATCATTAAAGTCCTCCAAGGACAACGTATTGGAACCCTTTTCCATAAAGATGCGCATATGTGGGTCCCACCAAAAGAGGTTGATGCACGTGAGATGGCAGTTGCAGCTAGGGACTGTTCCAGACGGCTTCAGGCATTATCATCGGAAGAGAGAAAACAAATTTTATTGAATATAGCTGATGCCCTGGAAGCACATCAAAAAGAGATCAGGATTGAAAATGAAGCTGATGTTGCTGCTGCACAACAAGCAGGATATGAAAAATCCTTAGTTGCTAGGCTGCTTGCAAGCCTTGCTAACAACATACGAATTATTGCAAACATGGAAGATCCGATTGGTCGAATATTAAAACGAACTGAGCTTGCAGAGGGGCTAATTTTGGAGAAAACATCATCTCCTATGGGAGTTCTTTTAATTGTTTTTGAGTCTCGCCCTGATGCCCTAGTACAGATAGCTTCCTTGGCAATCCGAAGTGGGAATGGGCTTCTTTTGAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAAGTAATTACTGAAGCCTTACCAGATACTGTTGGTGCAAAACTTATTGGACTTGTGACATCAAGAGCAGAAATTCCAGAGCTACTTAAGCTGGATGATGTAATTGATCTGGTGATTCCAAGAGGCAGCAACAAACTTGTCTCTCAGATCAAGAGTTCCACTAAAATTCCTGTTCTGGGTCATGCTGATGGAATTTGTCATGTCTATGTTGATAAATCTGCTAATTTGGAGATGGCAAGGCGGATTGTACTGGATGCAAAAATAGATTATCCAGCAGGCTGTAATGCCATGGAAACACTGCTTGTTCATAAGGATTTAATAGAGAAAGGTTGGCTCAACAATATTATTGTTGACCTACGGACAGAAGGCGTTACATTATATGGAGGACCCAAGGCAAGTTCTCTGTTAAATATTCCACTGGCTCGTTCATTGCATCATGAGTACAGTTCGTTGGCTTGCACTGTTGAAATTGTAGATGATGTTTATGCAGCTATTGATCATATAAATCTTTATGGAAGGCAATATTGTGGTAATGTGGTGGACTTAGATGGAAATTTGTCACATCTTCTCCTTCATGGCAGTTCACATACTGATGCCATCATCACAGAAGATCATGAAGTAGCTGATGTATTTCTACGCCAAGTAGACAGTGCTGCTGTTTTTCACAATGCTAGTACAAGATTCAGTGATGGGGCACGATTTGGACTAGGCGCAGAGGTTGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCAGTAGGAGTTGATGGATTGTTAACAACCAGATGGATTCTCAAAGGAAGTGGACAGGTAGTAGATGGTGACAAAGCAGTTAGTTACACACACAAAGACCTTGCTACTACTTGA 2196 0.4162 MENVDPCRDFIKDVKRIIIKVGTAVVTRQDGRVAVGKLGALCEQIKELNSLGYEIILVSSGAVGLGRQRLRYRKLINSSFADLQKPQVELDGKACAAVGQSSLMALYDTLFSQLDVTSAQLLVTDNDFRDKDFRKQLTETVKSLLALKVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLILLSDVEGLYSGPPSDPRSKLIHTYIKEKHQNEITFGDKSRVGRGGMTAKVKASIHAAEAGIPVIITSGCAAENIIKVLQGQRIGTLFHKDAHMWVPPKEVDAREMAVAARDCSRRLQALSSEERKQILLNIADALEAHQKEIRIENEADVAAAQQAGYEKSLVARLLASLANNIRIIANMEDPIGRILKRTELAEGLILEKTSSPMGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEALPDTVGAKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANLEMARRIVLDAKIDYPAGCNAMETLLVHKDLIEKGWLNNIIVDLRTEGVTLYGGPKASSLLNIPLARSLHHEYSSLACTVEIVDDVYAAIDHINLYGRQYCGNVVDLDGNLSHLLLHGSSHTDAIITEDHEVADVFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVDGLLTTRWILKGSGQVVDGDKAVSYTHKDLATT. 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02232 731 Pfam Aldehyde dehydrogenase family 293 552 IPR015590 GO:0016491
Seca6g02232 731 Gene3D - 5 283 IPR036393 -
Seca6g02232 731 CDD ALDH_F18-19_ProA-GPR 296 711 IPR000965 GO:0004350|GO:0006561
Seca6g02232 731 SUPERFAMILY ALDH-like 294 714 IPR016161 GO:0016491
Seca6g02232 731 NCBIfam glutamate 5-kinase 15 284 IPR005715 GO:0005737|GO:0006561
Seca6g02232 731 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 284 513 IPR016162 GO:0016491
Seca6g02232 731 FunFam Delta-1-pyrroline-5-carboxylate synthase 4 287 - -
Seca6g02232 731 Hamap Gamma-glutamyl phosphate reductase [proA]. 294 715 IPR000965 GO:0004350|GO:0006561
Seca6g02232 731 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Seca6g02232 731 NCBIfam delta l-pyrroline-5-carboxylate synthetase 8 632 IPR005766 GO:0003824|GO:0006561
Seca6g02232 731 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 2 729 - -
Seca6g02232 731 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Seca6g02232 731 Hamap Glutamate 5-kinase [proB]. 15 292 IPR005715 GO:0005737|GO:0006561
Seca6g02232 731 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Seca6g02232 731 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Seca6g02232 731 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Seca6g02232 731 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Seca6g02232 731 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Seca6g02232 731 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 514 620 IPR016163 GO:0016620
Seca6g02232 731 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 621 673 IPR016163 GO:0016620
Seca6g02232 731 PIRSF P5C_synthetase 619 731 IPR005766 GO:0003824|GO:0006561
Seca6g02232 731 PIRSF P5C_synthetase 1 628 IPR005766 GO:0003824|GO:0006561
Seca6g02232 731 Pfam Amino acid kinase family 15 260 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02232 Seca-Chr6 83251153 83257802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02232 K12657 - gmx:548058 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01005 8 14068333 14078402 Seca6g02232 6 83251153 83257802 ECH
Seca6g02232 6 83251153 83257802 Seca6g02232 6 83251153 83257802 ECH
Seca8g01005 8 14068333 14078402 Seca6g02232 6 83251153 83257802 PCT