Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01884 ATGCATTTAAACACATCTGAAGGTGTGACTTTGGAGATGCAGGTATGTGACAAGGGCATGTCATTTGTCTCTTGCAACGATGTTCCCAAGTTTCGTAGAAATATAGTTCTTCCCAGCATGTTTCCAAATGGTGGAAGCTATCAGGATGTTATTGACAGTGACAGTAATGGTAATATTGGCATTGGAGATGATATTAGTGGTGATGTTAATGAAAATTCTGAAGATGGTGTTCAAGCAGTGGAGAATCCTGTGATGCATGAGTTTACTGAGGAAGTTTCTGATTTCCCACTAGAGCGATGCATGAGGTTAGTGCCCCATTATCAGAACACTGGAGCCTTCTTTGTCGCTGTATTGCAAAAAGTTGCTCCTCTGCCAGCAATTCAGGTAAAAAGTAGGAAAGAAATTGATAAACAACATGTAGAACCAGCAAACCAGGGCAATGAGGTTGCACAAATATTGCAGATTAATCCATCAGAAAGTACACATGAAGAAGTTTTGGAAGAAGTTTCAGAGGCTAATATAAATGACAATGAACCCAATACAGAGGATTTGAAAATTAGTCCTGTTATATGTGAAGAAGGGGATTCCAGGGAAGCCCAAGAGCCCCGCAATGTAGAAAGCATAGCAAAGATCACTCAAGGCAAAAGAAAGCTGCAGATACAAGGCAAATGGAGAGGAATTGACCCTATTATCCTCTTCAAAGATGAAGTAGTTATTAACAGCATTAATGCATTTTATGGTATTGACAAGCAGTTTCCATTGGATGGTCACCTTGTAACAAGAAACAATGATACAAACCATGTTAAAAGGATTTACTATGTCTCCAAGCCAGTCAAGAATGTTCTTGAGTTGAACTTCTCAGTTGGGCAGCAACTTAAGATAACTTCCGTTGGCTTGAAGATTTTTGAAAGACAAACGTCACGTGGAGGTAGCTCTGCACCATGTGCTTTCCGGATCACCTCTGAAGGACTGCCCCTTATCCTCCCTCACATGACCAAACAGGTTCTACGTGCATCTCCTATAGACTTCAAGCATCTTCTGCAGTACAGAGCTGTAAAATTTGCAGATTTTGTTGATGCTGAGTTTGGTGAGAGGGCAGCAAACCTAATGCCAGGATGTTGTGTGGTAGTTCTGGGTGAAGGGAACAGAGCTGCTACAGAGCCCCTCCAAGTGGATGAGTCAACGATAGCCATTGGATGCTGGAAGGGTAAGGCAAGTTTGACCATAATGGTTACTGCAATGGAATGTCAAGAACTGCTTGAAAGGCTTTTAATGCGTTTAGACACAGCAGAAAAGGGCTCCTCCATGCAAGAGGACAAACAGACTAATAACATGGGAGATGAAGAACAGGAGTTGAATGGTAACAACGAAGATGTGGAAGCTACTGGATGTTAA 1395 0.4179 MHLNTSEGVTLEMQVCDKGMSFVSCNDVPKFRRNIVLPSMFPNGGSYQDVIDSDSNGNIGIGDDISGDVNENSEDGVQAVENPVMHEFTEEVSDFPLERCMRLVPHYQNTGAFFVAVLQKVAPLPAIQVKSRKEIDKQHVEPANQGNEVAQILQINPSESTHEEVLEEVSEANINDNEPNTEDLKISPVICEEGDSREAQEPRNVESIAKITQGKRKLQIQGKWRGIDPIILFKDEVVINSINAFYGIDKQFPLDGHLVTRNNDTNHVKRIYYVSKPVKNVLELNFSVGQQLKITSVGLKIFERQTSRGGSSAPCAFRITSEGLPLILPHMTKQVLRASPIDFKHLLQYRAVKFADFVDAEFGERAANLMPGCCVVVLGEGNRAATEPLQVDESTIAIGCWKGKASLTIMVTAMECQELLERLLMRLDTAEKGSSMQEDKQTNNMGDEEQELNGNNEDVEATGC. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01884 464 Gene3D Vaccinia Virus protein VP39 68 212 IPR029063 -
Seca6g01884 464 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 6 439 IPR023267 GO:0001510
Seca6g01884 464 MobiDBLite consensus disorder prediction 431 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01884 Seca-Chr6 76656254 76658485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01884 K15334 - gmx:100808598 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06108 12 153006593 153010668 Seca6g01884 6 76656254 76658485 PCT