Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01681 ATGGCCACCAACGAGATAGAGGTCAAGGCTGAGAGCAAGAACAAAGAACTAAAGCATCTGGGGTTTGTGAGGATTGCTGCTATTCAAACTTATGTGTTTGTGTCAAATCTGTATGAGTACGCAAAGAAGAACTCCGGACCTTTGAGATCCGCTGTTGGAATGGTGGAGGGCACTGTGACCACCGTTCTTGGTCCTGTCTACAACAAATTGAAGGGCGTTCCAGATGATGTCCTCGTTTTTGTTGACAACAAGGTGGATGAAGCTATTCATAAGTTTGATGAGCATGCTCCTCCTTTTGCTAAGCAGCTTGCGGACAAAGCCAAAGCTTTGATTCAGAAAGCAACAAATGAGGCGGGGAAAGTTGTAAGTGAGGCTCAATCTGGAGGGCCACGAGCAGCTGTAGATTATGTTGCTACAGAGTCAAAGCATTTTCTGCTTATTAATTCAGTGAAGTTATGGACTGGCCTCAACCACTTTCCACCATTCCACGCAGTGGCAGAGATGGCAGTTCCCACTGTTGCTCACTGCTCTGAAAAGTACAACCATGTAATTAAGGCCATGACTGATAAGGGTTACAGTTTCGTTGGGTATTTACCTTTGATTCCCATTGATGAGATAGCTAAGGCATTTAAACAGGGTGAAGCGAATTTGAAAGGTGATGAAGCGGCCTCTGAAGAACAGAAATCAGAATCGTCTAATTCTGATTAA 708 0.4435 MATNEIEVKAESKNKELKHLGFVRIAAIQTYVFVSNLYEYAKKNSGPLRSAVGMVEGTVTTVLGPVYNKLKGVPDDVLVFVDNKVDEAIHKFDEHAPPFAKQLADKAKALIQKATNEAGKVVSEAQSGGPRAAVDYVATESKHFLLINSVKLWTGLNHFPPFHAVAEMAVPTVAHCSEKYNHVIKAMTDKGYSFVGYLPLIPIDEIAKAFKQGEANLKGDEAASEEQKSESSNSD. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01681 235 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 231 IPR008802 -
Seca6g01681 235 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01681 Seca-Chr6 71094870 71098006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01681 - - gmx:100816931 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01681 6 71094870 71098006 Seca12g05709 12 148748121 148749467 PCT