Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01631 ATGTTAAACTGGGGCCCAGTGGTTGTGTCTGTTGTGCTGTTCTTGCTATTAACACCGGGCCTGCTATTTCAGGTACCTGGTCGTTCAAGGTGTGTGGAGTTTGGCAACTTTCAGACAAGTGCTGCTGCCATACTCGTTCATTCACTCCTCTACTTTGGTCTCATCTGTGTATTCTTGATTGCCATTAAGGTCCACTTTTACGATTGGGGTCCGGTGGTGATAGCAGTGGTGCTGTTTGTGGTGCTAAGCCCTGGCTTGTTGTTTCAATTGCCAGGGAGGAACAGAGTGGTGGAGTTTGGGAACATGCAAACTAGTGGAGTGTCTATTTTGGTCCACACAATCATCTTCTTTGGCCTCATTACAATCTTTCTTGTTGCTATTGGTGTGCATATCCACACTGGTTAA 405 0.4642 MLNWGPVVVSVVLFLLLTPGLLFQVPGRSRCVEFGNFQTSAAAILVHSLLYFGLICVFLIAIKVHFYDWGPVVIAVVLFVVLSPGLLFQLPGRNRVVEFGNMQTSGVSILVHTIIFFGLITIFLVAIGVHIHTG. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01631 134 PANTHER OS05G0103400 PROTEIN 68 133 IPR021775 -
Seca6g01631 134 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
Seca6g01631 134 Pfam Protein of unknown function (DUF3339) 68 132 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01631 Seca-Chr6 69552247 69554412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01631 - - tpra:123904908 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01631 6 69552247 69554412 Seca6g01631 6 69552247 69554412 ECH
Seca6g01631 6 69552247 69554412 Seca12g05725 12 148945124 148948268 PCT