Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05725 ATGTCTGATTGGGGCCCAGTGTTTGTGTCATTGGTGCTGTTCGTGCTGTTAACACCAGGACTGTTATTTCAGTTACCTGGAAGGTCAAGATGCGTGGAATTTGGGAACTTTCAAACCAGTGGTGCTGCCATAGTCATTCACTCCATTCTCTACTTTGGTTTCATTTGTATTTTCTTGCTCGCTGTTAAGGTCCACTTTTTTATTTATTATTTTGTGATGGCGGCAGATTGGGGTCCGGTGGTGATATCAGCGGTGCTGTTCGTGTTACTAAGCCCGGGGCTTCTGTTTCAGCTGCCAGGGAAGGGGAAGGTTGTGGCATTTGGGAGCATGCAAACTAGTGGGATCTCTATCTTGGTCCACACCATTCTCTTCTTTGGACTCATCACCATCTTTCTACTTGCTATTGGTGTGCATATCTACTCTGGATAA 429 0.4569 MSDWGPVFVSLVLFVLLTPGLLFQLPGRSRCVEFGNFQTSGAAIVIHSILYFGFICIFLLAVKVHFFIYYFVMAADWGPVVISAVLFVLLSPGLLFQLPGKGKVVAFGSMQTSGISILVHTILFFGLITIFLLAIGVHIYSG. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05725 142 PANTHER OS05G0103400 PROTEIN 75 142 IPR021775 -
Seca12g05725 142 Pfam Protein of unknown function (DUF3339) 1 66 IPR021775 -
Seca12g05725 142 Pfam Protein of unknown function (DUF3339) 75 140 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05725 Seca-Chr12 148945124 148948268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05725 - - ccaj:109810730 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01631 6 69552247 69554412 Seca12g05725 12 148945124 148948268 PCT