Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12027 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCTTCCCCTCCACTCTCCAAGAGGCTGCGTTGCTCCTCCGCCACTTCGCCGATTCGCTTCCCTCCTCCCTCTCTCATTGACCAGCTTCGCCCTCTCTTTCCTCATATGGATGACCTGGTTCTCGAGAGAGCTCTCCAAGAATGTGGCAATGATATAGATGCTGCCATCAAGAGGCTGAACGAGCTTTGCTTGGGAACTGCTGATGGGAATTTGGGAACTGCTGAAGAATCGGAGGTCAATGTTAATGTAGATGCAGGTATGGTTGAAAACTGTGCAGGTAAATTGGAAGATGATGGGAATGCTTCTGCTTCTGAGAGTCAGCCTGCTTTGAACAACCTTCCTGCGGATGGAGCAGAATGGATTGACTTTTTTGTTAGAGAAATGATGATTGCTACTAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGAATGCTGGAGGTTCTAGAGCAATCAATCAGTGCACGAGTGAGGGCCGGGGCAACTGATGCTCTTCAGAAGGAAAATTTGATGCTGAAGGAGCAAATTGAAGTGTTGATTAAGGAGAAAAATTCTTTTAAAAATGCATTTAGAATCCAGCATGAACGTTTTGCTGATTATGAGGAGAAGAACCAAGAGTTGCAGCATTTGAAGCAGTTGGTGTCTCAATACCAGGAGCAGATCAGGACTCTTGAGGTGAATAACTATGCTTTGGTAATGCACTTGAAGCAGGCTCAACAGAGCAACCCCTTTAATGGGCATTTCCCCCCTGATGTCTTCTAA 810 0.4654 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSATSPIRFPPPSLIDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGTADGNLGTAEESEVNVNVDAGMVENCAGKLEDDGNASASESQPALNNLPADGAEWIDFFVREMMIATSVDDARARAARMLEVLEQSISARVRAGATDALQKENLMLKEQIEVLIKEKNSFKNAFRIQHERFADYEEKNQELQHLKQLVSQYQEQIRTLEVNNYALVMHLKQAQQSNPFNGHFPPDVF. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12027 269 CDD CUE 41 76 - -
Seca4g12027 269 ProSiteProfiles CUE domain profile. 38 83 IPR003892 GO:0043130
Seca4g12027 269 Coils Coil 178 198 - -
Seca4g12027 269 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 269 - -
Seca4g12027 269 Pfam CUE domain 41 78 IPR003892 GO:0043130
Seca4g12027 269 Gene3D - 40 81 - -
Seca4g12027 269 Coils Coil 216 243 - -
Seca4g12027 269 SUPERFAMILY UBA-like 41 83 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12027 Seca-Chr4 261100450 261104858 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12027 - - gmx:100813137 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12027 4 261100450 261104858 Seca4g12027 4 261100450 261104858 ECH
Seca4g12027 4 261100450 261104858 Seca4g08426 4 200965837 200968843 PCT