Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11986 ATGAAGGAAAGTATGGGTAACCCTTTGCACCTTAAGTCTGTGAACCACATCTCCCTCATATGCAGATCAGTGGAAGAATCAATGGCCTTCTACCAGAACGTTCTTGGTTTTTTCCCCATCAGAAGGCCTGGCTCTTTTGATTTTGATGGGGCATGGCTATTTGGCTACGGAATCGGAATTCATTTGTTAGAAGCAGAGAACCCAGAGAAATTGCCAAGGAAAAAGGAAATAAATCCAAAGGATAATCATATATCTTTCCAGGTCAGATTTATGCAGTGTGAGAGTATGGGGGCAGTGGAGAAGAAGCTGAAGGAGATGGAGATTGATTACGTGCGAGCAACGGTAGAGGAAGGTGGAATACAGGTAGATCAGCTATTTTTCCACGATCCAGATGGTTTCATGATTGAGATATGCAACTGTGATAGTCTCCCTGTGATCCCCTTAGTGGGTGAGGTGGCAAGATCATGCTCGCGCCTCAACTTTCAGATGATACAGAATCAGCAGCAGATCCACAAAATTGTTCAGTAA 528 0.4394 MKESMGNPLHLKSVNHISLICRSVEESMAFYQNVLGFFPIRRPGSFDFDGAWLFGYGIGIHLLEAENPEKLPRKKEINPKDNHISFQVRFMQCESMGAVEKKLKEMEIDYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARSCSRLNFQMIQNQQQIHKIVQ. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11986 175 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 137 IPR004360 -
Seca4g11986 175 Gene3D - 2 146 IPR029068 -
Seca4g11986 175 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 5 139 IPR029068 -
Seca4g11986 175 CDD VOC_like 14 137 - -
Seca4g11986 175 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 140 IPR037523 -
Seca4g11986 175 PANTHER - 7 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11986 Seca-Chr4 260464042 260465483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11986 - - gmx:100306100 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11986 4 260464042 260465483 Seca4g11986 4 260464042 260465483 ECH
Seca4g11986 4 260464042 260465483 Seca4g08472 4 202042327 202042587 PCT