Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08472 ATGAATGAACAGTGTGAAAGCATGGGGGCAGTGGAGAAGAAGCTGAAGGAGATGGGAATTGGTTACGTGCGTGCAATGGTAGAGGAAAGTGGGATCCAAGTAGATCAGCTATTTTTCCATGACCCAGATGGCTTCATGATTGAGATTTGCAACTGTGATAGCCTCCCTGTGATTCCTTTATCAGGTGAGATGGTTAGATCATGCTCACGAATGAACCTTGATATGATGCAGCAGATACAGCAAGTTGTCAAGCAATTGTGA 261 0.4444 MNEQCESMGAVEKKLKEMGIGYVRAMVEESGIQVDQLFFHDPDGFMIEICNCDSLPVIPLSGEMVRSCSRMNLDMMQQIQQVVKQL. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08472 86 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 5 53 IPR029068 -
Seca4g08472 86 Gene3D - 3 52 IPR029068 -
Seca4g08472 86 PANTHER - 4 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08472 Seca-Chr4 202042327 202042587 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08472 - - tcc:18595729 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08472 4 202042327 202042587 Seca4g08472 4 202042327 202042587 ECH
Seca4g11986 4 260464042 260465483 Seca4g08472 4 202042327 202042587 PCT