Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11962 ATGGAGGCTGTTCTTCAGACCAGAGGGCTTCTCTCTCTCCCCACAAACCCCAGAAACAGGGTTTTGAACCCATCACACGGCTTAAAGCACAGATTTTTATCACTAAAGCCTAAAACCCTTGGTGGGTCTTCTCTAACCACTAATGGATTTCAAAAACTCCATGGCTTTGCATCAAAAGCCAATGGCTTTGGTCAAAAAGACAATAATTTGTTCATCTGCAAGGCTGAAGCTGCTGCTGCTGCTGATGGGCAACCGGTATTTGGGGAAATTGAGGCTGAGAAACCAAAATTCTTGGGAATTGAGATTACTACCATGAAGAAGATTATACCTTTGGGGATGATGTTCTTTTGCATCCTCTTTAATTATACGATTCTCAGAGACACCAAGGATGTCCTGGTTGTAACAGCAAGAGGAAGCAGTGCAGAGATTATACCATTTCTGAAAACATGGGTGAACCTTCCCATGGCTGTTGGATTCATGTTGTTGTACACAAAATTGGCTAATGTTTTGTCCAAGCAAGCTCTCTTCTACTCTGTTATTCTCCCTTTCATTGCTTTCTTTGGGGCGTTCGGGTTTGTTTTGTACCCTCTCAGCAACTATATCCACCCTCAGGCTTTTGCAGACAAGCTTCTCAATATCCTTGGCCCCCGGTTCCTTGGTCCACTTGCAATTATGAGAATATGGAGCTTCTGTTTGTTCTATGTCATGGCTGAATTATGGGGGAGCGTGGTCATTTCTGTGCTGTTTTGGGGGTTTGCTAATCAGATAACTACTGTTGACGAAGCAAAACGATTCTACCCACTTTTTGGACTTGGGGCCAATGTTGCCCTAATATTCTCTGGCCGGACAGTGAAATACTTCTCTAATCTGAGGAAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCCCTTAAAGCAATGATGAGCATTGTTGTGCTTATGGGGTTTGCAATCTGTTTCCTGTACTGGTGGGTGAATAACTATGTTCCTCTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAGGTACATCAGAGATCTTGCCACTTTAGTGGTTGCTTATGGAATTAGCATTAATCTCGTTGAGGTTACATGGAAGTCTAAGCTCAAAGCTCAGTTTCCTAGCCCCAACGAGTACTCTTCTTTTATGGGTGACTTCTCAACTGCAACTGGAATTGCCACATTCACAATGATGCTTCTAAGCCAATTTATATTCGACAAATATGGATGGGGAGTTGCTGCCAAGATAACACCTACAGTACTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTTATATTGTTTGGAGACCCACTTGGACCTGGTCTTGCAAAGTTTGGATTGACTCCACTACTAGCAGCTGTATATGTGGGTGCCATGCAGAACATTTTCAGCAAGAGTGCTAAGTACAGCTTATTTGATCCCTGCAAAGAAATGGCCTACATACCCTTGGACGAGGATACCAAGGTTTGGATTCTCTTCTTCTTTCCATCATATCTAACACTAAATGTTAAAGGGAAGGCAGCCATCGATGTTGTGTGCAATCCATTGGGGAAGTCTGGAGGTGCCCTTATTCAACAATTTATGATCTTAACTTTTGGATCACTAGCCAATTCAACTCCATACCTGGGAGGGGTGCTTCTGGTGATTGTTCTTGCCTGGCTGTCAGCAGCTAAGTCCTTGGACACGCAATTTACCGCATTGCGTCAGGAGGAAGAACTAGAGAAAGAAATGGAAAGAGCAGCTGCTGTGAAGATACCAGTGGTGGCTGAGAATGAGAGTGGGAATGGTTCTCTTGCAAGTGGTTCACCATTAAATCAAACGCCAGGTGACTCCTCAAGTAGTCCATCTGAAGCCTCAACTCCTCGCAACATTTAA 1923 0.4384 MEAVLQTRGLLSLPTNPRNRVLNPSHGLKHRFLSLKPKTLGGSSLTTNGFQKLHGFASKANGFGQKDNNLFICKAEAAAAADGQPVFGEIEAEKPKFLGIEITTMKKIIPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAVGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSNYIHPQAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNLRKNLGPGVDGWAISLKAMMSIVVLMGFAICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESLKFLVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGDPLGPGLAKFGLTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVWILFFFPSYLTLNVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLSAAKSLDTQFTALRQEEELEKEMERAAAVKIPVVAENESGNGSLASGSPLNQTPGDSSSSPSEASTPRNI. 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11962 640 MobiDBLite consensus disorder prediction 609 640 - -
Seca4g11962 640 NCBIfam NTP/NDP exchange transporter 100 580 IPR004667 GO:0005471|GO:0006862|GO:0016020
Seca4g11962 640 PANTHER - 1 639 IPR004667 GO:0005471|GO:0006862|GO:0016020
Seca4g11962 640 Pfam TLC ATP/ADP transporter 94 580 IPR004667 GO:0005471|GO:0006862|GO:0016020
Seca4g11962 640 SUPERFAMILY MFS general substrate transporter 209 473 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11962 Seca-Chr4 260291304 260295485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11962 1 614 Organic Solute Cotransporters AT1G80300 79.327 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11962 K03301 - jre:108993173 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11962 4 260291304 260295485 Seca4g11962 4 260291304 260295485 ECH
Seca4g11962 4 260291304 260295485 Seca4g08550 4 203867758 203871663 PCT