Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08550 ATGGAGGCTGTTCTTCAGACCAGAGGGCTTCTCTCTCTCCCCACAAACCCCAGAAACAGAGTCCTACACTCATCACAGGGCTTAAAGCATAGATTTTTCTCTCCAAAGCCTAAAATCCTTGGTGGGTCTTCTCTAACTTGTAATGGGTTTCAAAAACTCAATGGCTGTGTCTCAAAAGCTAGTGTCTTTGGTCAAAAAAATAGAAATTTGTTCATCTGCAGGGCTGAAGCTGCTGCTGCAGCTGATGGGCAACCAGTATTTGGGGAACCTGAAGTTGAGAAACCAAAGCTTTTGGGTATTGAGGTTGCAACGCTGAAGAAGATTTTACCTCTTGGGATGATGTTCTTTTGCATCCTCTTCAATTATACGATTCTAAGAGACACCAAGGACGTGCTGGTTGTGACGGCTAGGGGAAGCAGTGCTGAGATTATACCATTTCTGAAAACTTGGGTGAACCTTCCCATGGCTATTGGGTTCATGTTGCTGTATACAAAATTGGCTAATGTATTGTCCAAGCAAGCTCTCTTCTACTCTGTTATTCTCCCCTTTATCGCCTTCTTTGGGGCGTTTGGGTTTGTTCTGTACCCTCTTAGCAGCTATATCCACCCTGAGGCATTTGCGGATAAACTTCTTAACATCCTTGGCCCCCGGTTCCTTGGTCCACTTGCAATTATGAGAATCTGGAGTTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTGGTTTCTGTGCTGTTTTGGGGGTTTGCTAATCAGATAACTACAGTTGAGGAAGCAAAACGATTCTACCCACTATTTGGACTTGGGGCCAATGTGGCCCTTATATTCTCTGGCCGGACAGTGAAATACTTTTCTAATCTGAGGCAAAATTTAGGTCCTGGAGTTGATGGTTGGGCTATCTCTCTAAAAGCAATGATGAGCATAGTTGTGGGTATGGGACTTGTGATATGTTTCTTGTACTGGTGGGTGAATAATTATGTTCCACTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAAATATATAAGGGATCTTGCCACTTTAGTGGTTGCATATGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCTCAGTTTCCTAGCCCAAATGAATACTCATCTTTTATGGGGGACTTCTCAACTGCAACTGGAATTGCTACATTCACAATGATGCTTCTAAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCAAGATTACACCTACTGTCCTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTCATATTATTTGGTAACCCACTGGGACCTGCTCTTGCAAAGTTTGGAATGACTCCATTGCTAGCTGCTGTATATGTCGGTGCCATGCAGAACATATTCAGCAAGAGTGCTAAGTACAGCTTATTCGATCCATGCAAAGAAATGGCCTACATACCCTTGGATGAGGATACCAAGGTCAAGGGGAAGGCAGCAATTGATGTTGTGTGCAACCCATTGGGAAAGTCTGGAGGTGCTCTAATTCAACAATTTATGATCTTAAGTTTTGGTTCACTGGCGAATTCAACTCCATATCTTGGAGGGGTACTTCTGGTGATTGTTCTTGCCTGGTTAGCAGCAGCCAAGTCCCTGGATACCCAGTTCACTGCCTTGCGTCAAGAAGAAGAACTTGAGAAAGAGATGGAAAGAGCAGCTGCTGTTAAGATACCAGTAGTTGCTGAGAATAAGGATGGAAATGGTTCTCTTTCAAGTGTTTCACCCTTAAATCCAGAGGCAGGTGACTCCTCATCTAGTCCATCTGAAGCCTCAACTCCTCGCAACATTTAA 1881 0.4349 MEAVLQTRGLLSLPTNPRNRVLHSSQGLKHRFFSPKPKILGGSSLTCNGFQKLNGCVSKASVFGQKNRNLFICRAEAAAAADGQPVFGEPEVEKPKLLGIEVATLKKILPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSSYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTVEEAKRFYPLFGLGANVALIFSGRTVKYFSNLRQNLGPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGNPLGPALAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGGVLLVIVLAWLAAAKSLDTQFTALRQEEELEKEMERAAAVKIPVVAENKDGNGSLSSVSPLNPEAGDSSSSPSEASTPRNI. 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08550 626 NCBIfam NTP/NDP exchange transporter 100 566 IPR004667 GO:0005471|GO:0006862|GO:0016020
Seca4g08550 626 SUPERFAMILY MFS general substrate transporter 212 474 IPR036259 -
Seca4g08550 626 MobiDBLite consensus disorder prediction 595 626 - -
Seca4g08550 626 PANTHER - 1 625 IPR004667 GO:0005471|GO:0006862|GO:0016020
Seca4g08550 626 MobiDBLite consensus disorder prediction 593 626 - -
Seca4g08550 626 Pfam TLC ATP/ADP transporter 96 566 IPR004667 GO:0005471|GO:0006862|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08550 Seca-Chr4 203867758 203871663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08550 1 600 Organic Solute Cotransporters AT1G80300 81.639 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08550 K03301 - jre:108993173 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08550 4 203867758 203871663 Seca4g08550 4 203867758 203871663 ECH
Seca4g11962 4 260291304 260295485 Seca4g08550 4 203867758 203871663 PCT