Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11862 ATGCCATTCACGTTAACACCTCGATCCATGCCGGAAATTCCCGTCGATTTCCGTGCTCCACCGCCGTCTCCGGTCGCCTCCGGCAGAAAATCGTCCGTTACGAACGATGAAGTTCTGACGGAGTTCTTGGAAGCCTCGCTCCGCGTCCCGGATCTGGTGTTACCCGATAAGATCTTCCCCAAAGAGAAGCACCTCGAAACGCCTCCCAAGGTTGATTTCGTGTCACTGTGTTTCCACCATGACGACGCTCTCCGCGACGTCGTTTCCGACTCCATGGCCACTATCGGATGCTTCCAGCTCCTCAACCACGGCATTCCGCCGCAACTCCCCGCCTCCGCCGCAGAGGCCGCCGCCGGAATCTTTCATGTGCCGACGGGAAAGCGAGGACCGGCAACGAGGTCGCCGGAGAAGCCCTGGGGGTTCGAGGAGTATCATGCAGGGGAAGAGGAAGATGAACAGGGAAGTGAATTCAGTGAAGAATTCGTGTGGTGCAAAGATGATGAGTTGAAGTTGAAAATGGAGGGAATTTGGCCAATTGGATATCCAAATTTCAGCAAGAAGATGGAAATTCTTCAATCGCGCATAGAGACGGTGGCTGAGAAAGTTTTGGGTGTTATATTGAAAGACATTCCTAGTCCTAGGAAAATGGCAAGTGATGGAAATGAATTTGGGACACTTTGTTGCGTGTTTAAGCATCGGAGAGAGAATAGGGGTGACCGATGGGATAACTCTTTAAAATATGACGTGATTAGAATGCTCATTAGGGGAGGCGATTACTCTCATTCTTTGTGTTTGCATCTATGTAATGGGTCTTCGGAATTTCACGTTTACTCCAAGAAAAGTTGGCTCTCTTTCTGCCCGGAAGAAGGTGCAATTATAATCACCGCTGGAGATCAAGCCCAGGTGAGGTTATATGTAACACTTTTGCCTCCCTCTCTTTAA 942 0.5 MPFTLTPRSMPEIPVDFRAPPPSPVASGRKSSVTNDEVLTEFLEASLRVPDLVLPDKIFPKEKHLETPPKVDFVSLCFHHDDALRDVVSDSMATIGCFQLLNHGIPPQLPASAAEAAAGIFHVPTGKRGPATRSPEKPWGFEEYHAGEEEDEQGSEFSEEFVWCKDDELKLKMEGIWPIGYPNFSKKMEILQSRIETVAEKVLGVILKDIPSPRKMASDGNEFGTLCCVFKHRRENRGDRWDNSLKYDVIRMLIRGGDYSHSLCLHLCNGSSEFHVYSKKSWLSFCPEEGAIIITAGDQAQVRLYVTLLPPSL. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11862 313 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 11 302 - -
Seca4g11862 313 Gene3D - 52 304 IPR027443 -
Seca4g11862 313 MobiDBLite consensus disorder prediction 1 33 - -
Seca4g11862 313 SUPERFAMILY Clavaminate synthase-like 59 302 - -
Seca4g11862 313 Pfam non-haem dioxygenase in morphine synthesis N-terminal 71 164 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11862 Seca-Chr4 259285653 259287083 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11862 - - psat:127076483 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11862 4 259285653 259287083 Seca4g11862 4 259285653 259287083 ECH
Seca4g11862 4 259285653 259287083 Seca4g08705 4 207311694 207315815 PCT