Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11841 ATGGAGAAAAGAATGGTTAGAAAGTTTTTAAATGTGTTGGGGAGAGAGGAAAGAGGCATGAAGCCTATTTTGCTGAAATGTGGTTTGGCTTTGGCTCTTACCTTTGCTGGATTTCTCTACTCTCACATGAGAACCAGAAGAATCAAACCTTCTGGTACTTCCCCCAGGGGGAACCCTTCAGGTCATGGGAGAGAGGCTAATTTAGGAGGTGGTATAAGAGCATCTGGTTCTTGCAGCACTCTTTCAGAGACAAATATTTTGGATAATGTAAGTTACATGAGAAAAGAAGAAACATGCATCAACAAGGTGTTTGGTAAAAATTCTCCAATTATTCTCTCTCCAAGAACTAAACAAAGTGGAGAGAAAGATGAGTTCCTCAATGATCTTATGAAGGAAGGAGACTTTGGAGCAGGAAATTCTTCTAAGAAAGAGGTAGAAACACCAAGGTCAAAAGTAGGATCTCCTGTAGCATATCCAAGTCTTGAGAAGGATGACTATGAGCAAGAGATTAGGCAACTGAGGAACATGATCAGAATGCTTCAAGAGAGGGAAAGAAGTCTTGAGGTTCAACTGCTTGAATACTGTGGTCTAAGAGAGCAAGAAACAGTTGTGATGGAACTCCAAAATAGATTGAAGATAAGTAGTATGGAGGCAAAGATGTACAATCTGAAGGTTGAGACCTTACAGTCTGAGAATAGGAGATTAGAGGCACATGTGGCTGATCATGCAAAATTGCTGGGTGAGCTTGAGACAGCAAAAACAAAAGTCAAATTTTTGAAGAGGAAAATTAGGTATGAAGCTGAACAGAACAGGGAGCATATCATGAATCTTAAACAAAGAGTAGCTAAGTTGCATGACCTTGAAAGCAAAGCTGCTGCTAGTGATCAAGAAATTCAAATAAAGCTGAAAAGGCTAAAGGATCTTGAGGCTGAGGCTGAACAATTGAGGAAAACTAATTTGAGACTGCAGATGGACAATTCTGATTTAGCTAGAAGATTGGATTCTACTCAAATCCTTGCAAATGCTGTTCTGGAAGATCCAGAAGCAGATGCTTTGAAGGAAGAAGGTGAGCGTCTGAGACAAGAGAATGATGGATTGGTGAAAGATATTGAGCAACTACAAGCTGATAGATGCTCAGATGTTGAAGAATTGGTTTACTTGAGATGGATAAATGCTTGCTTAAGACATGAACTGCGAAATTATCAACCTCCACCTGGTAAAACAGCTGCAAGGGACTTGAGTAAAAGCTTAAGTCCTACATCTGAGAAGAAAGCCAAGCAACTTATACTTGAATATGCAAATTCTGATGGGAGAGGGAGGCTTTCTGATTTTGATTCTGACCAATGGTCCTCCTCTCAGGCTTCTTTTCAAACAGACTCTGGAGAGTGTGATGATTATTCTCCTCTTGATAATAATTCATCTGATGTCATTGCTAGAGCTAACACCACAAGCAAGTCAAAGGTTCTTAGCAAGCTTATGAAGTTGATACGAGGCAAAGATAGCCATAATCAACGTAGAGTTACATCTCAAGAAAAATCTATGTCTCAAGAATATAGCAATTCTCCACATTTCAGCTTGAGTTTATCAACTGGAAATGAGGGTCTTAGGAGTGAGTTTGCAACTCCAACTGACACATCTAGAACTTCCTTAGATTTCAACCCTACATTGAGTATGAAGGATGAAAATAGGAGAAATTCAGATGCTGTTACCCCAGGAAGCTCAAAGAATTACAGTTTAAGTAAGAGAAGTTCAGGAGATTTCAGAGCCCGCATTGATTCTTTCTCAGACTCCCCTGGCACAGACAAATCCAATTTGGTCAAATATGCTGAAGCTTTAAAAGATTCTACTCCCAAAAGGATACATAGAAGATCAGCATCATATAGTTCATTTTAA 1893 0.3941 MEKRMVRKFLNVLGREERGMKPILLKCGLALALTFAGFLYSHMRTRRIKPSGTSPRGNPSGHGREANLGGGIRASGSCSTLSETNILDNVSYMRKEETCINKVFGKNSPIILSPRTKQSGEKDEFLNDLMKEGDFGAGNSSKKEVETPRSKVGSPVAYPSLEKDDYEQEIRQLRNMIRMLQERERSLEVQLLEYCGLREQETVVMELQNRLKISSMEAKMYNLKVETLQSENRRLEAHVADHAKLLGELETAKTKVKFLKRKIRYEAEQNREHIMNLKQRVAKLHDLESKAAASDQEIQIKLKRLKDLEAEAEQLRKTNLRLQMDNSDLARRLDSTQILANAVLEDPEADALKEEGERLRQENDGLVKDIEQLQADRCSDVEELVYLRWINACLRHELRNYQPPPGKTAARDLSKSLSPTSEKKAKQLILEYANSDGRGRLSDFDSDQWSSSQASFQTDSGECDDYSPLDNNSSDVIARANTTSKSKVLSKLMKLIRGKDSHNQRRVTSQEKSMSQEYSNSPHFSLSLSTGNEGLRSEFATPTDTSRTSLDFNPTLSMKDENRRNSDAVTPGSSKNYSLSKRSSGDFRARIDSFSDSPGTDKSNLVKYAEALKDSTPKRIHRRSASYSSF. 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11841 630 MobiDBLite consensus disorder prediction 400 422 - -
Seca4g11841 630 MobiDBLite consensus disorder prediction 508 556 - -
Seca4g11841 630 MobiDBLite consensus disorder prediction 131 155 - -
Seca4g11841 630 Coils Coil 349 376 - -
Seca4g11841 630 MobiDBLite consensus disorder prediction 567 583 - -
Seca4g11841 630 MobiDBLite consensus disorder prediction 47 74 - -
Seca4g11841 630 Coils Coil 218 262 - -
Seca4g11841 630 Coils Coil 163 190 - -
Seca4g11841 630 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 21 513 IPR040265 -
Seca4g11841 630 MobiDBLite consensus disorder prediction 496 583 - -
Seca4g11841 630 MobiDBLite consensus disorder prediction 441 474 - -
Seca4g11841 630 Coils Coil 291 332 - -
Seca4g11841 630 MobiDBLite consensus disorder prediction 444 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11841 Seca-Chr4 259031911 259035216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11841 - - gmx:100781632 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11841 4 259031911 259035216 Seca4g11841 4 259031911 259035216 ECH
Seca4g11841 4 259031911 259035216 Seca4g08733 4 207934225 207938013 PCT