Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08733 ATGGTGATGCTGATGATCAAAGAGGAGAGGGGTGTGAAGCCTACTCTATTGAAATTTGGTTTGGCTGTGGCTCTCTCGTTTGCTGGATTTCTCTACTCACGCCTTAAAACCAGAAGAATCAAGCCCTCCACTAAGTCACCCCCTTCAGTGTCTTTCTCAGGTCATGGGAGTGAAGTTGATTTAGAAGAAACTATAGGGGCAGCATTAAGTACTTGCAAATCCATTTCAGAGGAAGAATTTATATATACTGAAGGAACATGCACTAACCGGGAAATGAGTGACAATTCTCCCATTGCTCTCTCTCCTAGCAGTAAACAAAATGGAGATAAAAATGAGTTCCTCCTACCTGAATTTAATGATCTTTTAAAGGAAGCAGACTTTGGAGCCAACATTGTAGGAAATTCTTTTGAAAAAGATCCAGAAATAGAAGCAACAAGGTTAAAAGTAGGATCTTCTATAGCATATGCAGGTCCTGAGAAGGATGACTATGAGCAAGAGATAAGTCAACTTAGGAACATGATTAGAATGCTCCAAGACAGGGAACAAAGTCTTGAAGTTCAGCTGCTTGAGTACTGTGGTCTTAGAGAGCAACAAACAGCTGCAATGGAGCTCCAAAATAGACTGAAAATAAGTAATATGGAGGTAAAAATGTTCTCTCTGAAGGTAAAGACATTACAGTCTGAGAATCAGAGATTAAAGAAACAGGTTGCTGATCATGCAAAGGTGCAGGTTGAGCTTGAGACTGCAAAAGCGAAAGTTGAAATGCTCAGTAGGAAAATCAAGTATGAAGCTGAATGGAATAGGGAGCAGATCATAACTCTTCAACAAAAAGTTGCCAAGTTGCATGACCAAGAATGCAAAGACGCTTCTTGTGATCAAGATATTCAAATAAAGCTGCAAAAGCTAAAGGATCTTGAGTCTGAAGCAGAAGAGTTGAGGAACTCTAATTTAAGACTGCAGATAGAAAATTCTGAATTAGCTCAAAGATTGGATTCAACCCGGATCCTTGCAAATGCTGTTCTGGAGGACCCGGAGGCAAATGCTGTGAAGCAAGAAAGTGAGTGTCTTAGACAAGAAAATGAGGACTTGATGAAGCAAATTGAGCAACTACAATCTGATAGATGTTCAGATCTTGAAGAATTAGTGTATATGAGGTGGATAAATGCTTGCTTACGATATGAACTGCGGAATTATCAACCCCCACCTGGTAAAACAGTTGCAAAGGACTTAAGTAAAAGCTTAAGCCCCACGTCTGAGAAGAAAGCCAAGCAGCTTATACTTGAATATGCATGTACTGATGGACCAGGGAGCATTGTGGAGTTTGATTTAGACCAATGGTCCTCCTCCTCCTCCCAGGCTTCTTTCCTTACTGACTCTGGAGAGTATGATGATTTTGCTTCTGTTGATAATTCATCTGCTGCCAGAGCTAACACCACAAGCCAGACCAAAATTTTTAGCAAGCTTAGGAAACTGATACAAGGCAAAGATAGTCATGATCACCAAATTAATGTTTCATCTGGACATGAAGAAGATAGCAATGCTCCACTGCTGAGTACATCAACTGGAACTGGGGGTCTTAGGAGTGAGTTTGCAACTCCTATTGTAACATCTAGAACTTCCTTTGATTTCTCCAGGTTGACAAGTGTGAAGGAAAGAGATAGGAATAGGAGATATTCAGGTAGCATTGTTATGGGAAGCTCAAATAAATTTGGTTTAAGTAAAGAAGGTTCCTTCTCAGAATCCTTAGGCAAAGAGAAATCTGATTTGGAGAAATATGCAGAAGCTTTAAAAGATTCTAGTGGGAGTGCTAAACTTCAAAGACGTAGAAGATCAGCATCATGTAGTTAG 1848 0.4004 MVMLMIKEERGVKPTLLKFGLAVALSFAGFLYSRLKTRRIKPSTKSPPSVSFSGHGSEVDLEETIGAALSTCKSISEEEFIYTEGTCTNREMSDNSPIALSPSSKQNGDKNEFLLPEFNDLLKEADFGANIVGNSFEKDPEIEATRLKVGSSIAYAGPEKDDYEQEISQLRNMIRMLQDREQSLEVQLLEYCGLREQQTAAMELQNRLKISNMEVKMFSLKVKTLQSENQRLKKQVADHAKVQVELETAKAKVEMLSRKIKYEAEWNREQIITLQQKVAKLHDQECKDASCDQDIQIKLQKLKDLESEAEELRNSNLRLQIENSELAQRLDSTRILANAVLEDPEANAVKQESECLRQENEDLMKQIEQLQSDRCSDLEELVYMRWINACLRYELRNYQPPPGKTVAKDLSKSLSPTSEKKAKQLILEYACTDGPGSIVEFDLDQWSSSSSQASFLTDSGEYDDFASVDNSSAARANTTSQTKIFSKLRKLIQGKDSHDHQINVSSGHEEDSNAPLLSTSTGTGGLRSEFATPIVTSRTSFDFSRLTSVKERDRNRRYSGSIVMGSSNKFGLSKEGSFSESLGKEKSDLEKYAEALKDSSGSAKLQRRRRSASCS. 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08733 615 Coils Coil 295 329 - -
Seca4g08733 615 Coils Coil 346 373 - -
Seca4g08733 615 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 15 547 IPR040265 -
Seca4g08733 615 MobiDBLite consensus disorder prediction 496 523 - -
Seca4g08733 615 Coils Coil 160 187 - -
Seca4g08733 615 Coils Coil 194 259 - -
Seca4g08733 615 MobiDBLite consensus disorder prediction 595 615 - -
Seca4g08733 615 MobiDBLite consensus disorder prediction 507 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08733 Seca-Chr4 207934225 207938013 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08733 - - gmx:100819899 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08733 4 207934225 207938013 Seca4g08733 4 207934225 207938013 ECH
Seca4g11841 4 259031911 259035216 Seca4g08733 4 207934225 207938013 PCT