Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11771 ATGACAGACAGGGTCCACCCTTCGGCCAAGCCCACCGCCACCGCCACCGCCGCCAACCCATCATTCCCGGCGACAAAAGGGCAACTCTACGGTGCCACCCGCCCCACCTACCGCCCCCAATCCACCCACCGTCGTAGCAGCCGTAGTTGTTGTTGCACCCTTTGCTTCTGGCTGATCCTCATTCTCCTCTTCCTCCTCATCCTCCTCGGAGCTGCCGGCACCGTCCTCTACTACCTCTACCGCCCTCACCGTCCTTCATTCTCCGTCACCTCCCTTAAACTCACCTCTCTCAAACTCTCCCCCTCCTCCTCCGCCCTTACTTCCAACTTCGACCTCACCCTTTCCGCCACCAACCCCAACAACAAAATCGTATTTTTCTACCAACCCACCTCCGTCTCCATCCTCGCCGGCGACGTCGACGTCGGCGATGGCACCATTCCCGCATTCGAGCACGTGGAGAAGAACACGACGCTGCTGGAAGCTTTGGTTTCGAAGAGTGGGGAGGTTGTAGAGGGTGACGCGGGGACGATGCTAAAGGAGAGCTTGAAGAGCAAGAGTGGGTTGGCGTTGAAGGTGAAGATGGAGACAAAGGTGGAAGCCAAGATGAGTGTGTTTAAGACCCCCCGTGTTGGAATCAGAGTGTTGTGTGATGGCATCGACGTTGCTCTTCCCGCCGGCGAGAAACCGGCGACGGCATCGACTACGGATGCCAAATGCGAGGTGGATGTGAGATTCAAGGTCTGGAAATGGACTCTTGGATGA 762 0.5761 MTDRVHPSAKPTATATAANPSFPATKGQLYGATRPTYRPQSTHRRSSRSCCCTLCFWLILILLFLLILLGAAGTVLYYLYRPHRPSFSVTSLKLTSLKLSPSSSALTSNFDLTLSATNPNNKIVFFYQPTSVSILAGDVDVGDGTIPAFEHVEKNTTLLEALVSKSGEVVEGDAGTMLKESLKSKSGLALKVKMETKVEAKMSVFKTPRVGIRVLCDGIDVALPAGEKPATASTTDAKCEVDVRFKVWKWTLG. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11771 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 13 229 - -
Seca4g11771 253 MobiDBLite consensus disorder prediction 1 44 - -
Seca4g11771 253 MobiDBLite consensus disorder prediction 7 23 - -
Seca4g11771 253 Pfam Late embryogenesis abundant protein 113 214 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11771 Seca-Chr4 258073274 258074035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11771 26 240 EF-hand Containing Proteins AT5G21130 25.455 1.93e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11771 - - gmx:100819194 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11771 4 258073274 258074035 Seca4g08802 4 210049141 210049908 PCT