Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08802 ATGACAGATAGGGTATACCCTTCGGCCAAGCCTCCAGCCACTAACGGTAACAGCGCCGCCGCTAACCCAACTTTTCCAGCCACAAAGGCCCAACTCTACGGCGCCAACCGCCCTACCTACCGTCCTCAACCCTACCACCGCCGTAGCCGCCGCCGATGCTGCTGCAGATTCTGCTTCTGGTTCATCCTCATCATCCTCATCCTCCTCCTCCTCATCGGAGTCGCCGGAACCGTTTTCTACTTACTCTACCGTCCCCATCGTCCTTCTTTCACCGTCACTTCCCTCAAACTCTCCTACCTCAACCTCACCTCTTCTTCCACTCTCAACTCAAAATTCGATCTCAACGTCACTGCTAAAAACCCTAACAAGAAGATCGATTTCTCCTACGATCCAACCTCAATTTCCATCTTCTCCGGCGATGTCGACATCGGCGATGGGAACATACCTGCTTTCGAGCACGGGAAGAAGAACACGACGCTGCTGAAAGCTTCGATTGTAAGCAGTGGTGTGCCACTGGAGAGTGACGCTGAGAAACAGTTAAAGGCTAGCATGAAGAGTAAGAACGGTTTGCCGTTGAAGGTGAAGTTGGAGACGAAGGTGAAGGCCAAGATGGGGAGCTTGAAGACACCTCATGTTCGAATCAGAGTCACTTGTGACGGAATCAGGGTCAATCTTCCCGCCGGTAAGAAACCGGCGACGGCGTCCACTTCGAACGCACAGTGCAACGTCGATGTCAGGTTCAAGATCTGGAAGTGGACCCTTGGTTGA 768 0.5286 MTDRVYPSAKPPATNGNSAAANPTFPATKAQLYGANRPTYRPQPYHRRSRRRCCCRFCFWFILIILILLLLIGVAGTVFYLLYRPHRPSFTVTSLKLSYLNLTSSSTLNSKFDLNVTAKNPNKKIDFSYDPTSISIFSGDVDIGDGNIPAFEHGKKNTTLLKASIVSSGVPLESDAEKQLKASMKSKNGLPLKVKLETKVKAKMGSLKTPHVRIRVTCDGIRVNLPAGKKPATASTSNAQCNVDVRFKIWKWTLG. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08802 255 Gene3D - 77 218 - -
Seca4g08802 255 MobiDBLite consensus disorder prediction 1 23 - -
Seca4g08802 255 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 233 - -
Seca4g08802 255 Pfam Late embryogenesis abundant protein 115 218 IPR004864 -
Seca4g08802 255 SUPERFAMILY LEA14-like 67 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08802 Seca-Chr4 210049141 210049908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08802 29 245 EF-hand Containing Proteins AT5G21130 28.959 1.22e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08802 - - gmx:100819194 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08802 4 210049141 210049908 Seca4g08802 4 210049141 210049908 ECH
Seca4g11771 4 258073274 258074035 Seca4g08802 4 210049141 210049908 PCT