Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11329 ATGATTTTTGATATACCGCCATGGTTTTCTGCAGTGTCAATAGCATTGAACTCAGATGTAGATCTTGATGTTGCAAGAGTTGACAGGGTTCCAAAAAGTACACTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCTCTGCCAGATGCTTTAAACACATCCCTGAAAGATTCAGCTGTCTCAGGAATAAATGGTCTTGATGTGGAGCAGTGCTTTCCTATGGAGAAAAACATAACCATGAAATTGACTAACGAGCAGATATCTCCAGGTGCTTGGTACATTGGTCTTTTCAATGGCATTGGACCTACAAGGACACAGTCGAAGATGATTATCCGAGGCTCAGCATACTCCTTTAGTGCCAATATAAGTGTGGATGCGTGCACAAATTCAATGATGAGGGGGGAGTTCTGTAACAGTACAGTCTATCCACTTTCATGCACAGCATCTGATGTCTATAATTCTAAGACTACAGTGAAGCAACCAATGATGGGAAATGCAATGATCTGTGAAAGTAACTTTGCAACTTTTTGTGTTCAGGAAGGTGTTCCAAACTTTTACTCCTTGGATATAGCAAATGTGGCAGAAGAATTGACCATTATGGCAGCAAATGTCAGATTCAATGTTACACCTTCAAATAATGCTTCTGGTGCAAATGATGTTAATTTAATGTGTTATGCTCGCCATGGTGCAATACCTTCCGAGACTTTGCATGATTATTCCAGTGATTTAAATAAAGCCCCTCTAGTTATTCGCTCTCCATTGATTGGTCGTTTGTACATTAGTATAATACCAGTTAATCTAACAAAAAAGTTTGGAGAGACTCAGGATGGCAATTTAAAAGTTTGCTATGCGATCAAATCACAAGTGCTTCAGTGCCCTCTTGGAAAAGCTGGATCAAATTGCACAATGAGTAGCTACACACTTCAGACGGTTCTAAGGAGGGGTCCAACCCCGTTTGAATCATATTATTTACCTGTTGGTGAAGGAGCATCTTCTGCTAATTTTCCTCTTGAGCCACTTTCAAAAAACTCATCAAATGGAGGAGAAGCTGATGACATTTGGACATACTTTACTTTGGACATTCCTCCTGGTGCAGCTGGACGAAATATTCACATACGGCTATCATCAGATGTGAAGATCAATTATGAAGTTTATGCTAGATTTGGTGGATTGCCTTCTCTTGATAGTTGGGACTATTATTATGCTAACAAGACAAGGAAGAGTGATCAATCCATGTTTTTCATGCTATATGATTCAAGTGATGACAATATTGATTTTTACATTATTTATGCTAGAGAAGGAACTTGGGGTTTAGGTCTGAGGCATCTTACTACCAACAGTGACTCTTTGAAACAGCAAACCATCATGTCTATTTCACTGGAAGGATGCCCAAAACAATGCTCATCTCATGGGGACTGTAAATATTCTTTTGATGCTAGTGGACTGACATCATACAGCTTCTGCTCCTGTGATCGAAACCATGGTGGCTTTGACTGTAGCATCGAAGTTGTATCACATAAAGGGCATATAGTGCAATCAATTTTTCTTATTGGATCAAATGCTGCAGCCATACTTCCTGCCTTTTGGGCCCTTCGGCAGAAGGCATTTGCAGAATGGGTTTTATTCACATCCAGTGGAATTTCAAGTGCACTATATCATGCATGTGATGTAGGCACCTGGTGTGCATTGAACTTCAATGTGCTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTTGTATACCTTTCTACCATTGATGAAGTATATAAGAGGGCAATCCACACAGCTGTAGCTATCCTTACTGCTCTCATGGCTGCAACGAAGGCAACCAGATCTTCCAATATCGTTCTTGTGATTGTGATTGGGGCTCTTGGTCTTCTTATTGGATGGTTGATAGAAATCTCAACAAAATATAGATCCCTATCCTTCTCATTTGGATTCTCACCAAATTTCTTTCAAAGTTTGCAAACTATAAGGCAATGGTTCTATAATCTTGTCAAGACAATTTTGAGACGGTTCCGGTGGTTCTTTTTATTGGCCGGTTTTATTGCATTGTCCATGGCAGCATTAAGCTGGACACTTGAAACCAGTGAAAACTACTGGATTTGGCATAGCTTTTGGCATATTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATATTGTGGATGATGCTGAGAATCAGCTACCTTCAAGTGGGAACTATGCACTGACTCGTCAGGATTCATTACCAAGAGATAATAATTAA 2274 0.3971 MIFDIPPWFSAVSIALNSDVDLDVARVDRVPKSTLPIICFRDGSPPLPDALNTSLKDSAVSGINGLDVEQCFPMEKNITMKLTNEQISPGAWYIGLFNGIGPTRTQSKMIIRGSAYSFSANISVDACTNSMMRGEFCNSTVYPLSCTASDVYNSKTTVKQPMMGNAMICESNFATFCVQEGVPNFYSLDIANVAEELTIMAANVRFNVTPSNNASGANDVNLMCYARHGAIPSETLHDYSSDLNKAPLVIRSPLIGRLYISIIPVNLTKKFGETQDGNLKVCYAIKSQVLQCPLGKAGSNCTMSSYTLQTVLRRGPTPFESYYLPVGEGASSANFPLEPLSKNSSNGGEADDIWTYFTLDIPPGAAGRNIHIRLSSDVKINYEVYARFGGLPSLDSWDYYYANKTRKSDQSMFFMLYDSSDDNIDFYIIYAREGTWGLGLRHLTTNSDSLKQQTIMSISLEGCPKQCSSHGDCKYSFDASGLTSYSFCSCDRNHGGFDCSIEVVSHKGHIVQSIFLIGSNAAAILPAFWALRQKAFAEWVLFTSSGISSALYHACDVGTWCALNFNVLQFMDFWLSFMAVISTFVYLSTIDEVYKRAIHTAVAILTALMAATKATRSSNIVLVIVIGALGLLIGWLIEISTKYRSLSFSFGFSPNFFQSLQTIRQWFYNLVKTILRRFRWFFLLAGFIALSMAALSWTLETSENYWIWHSFWHITIYTSSFFFLCSKANIVDDAENQLPSSGNYALTRQDSLPRDNN. 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11329 757 ProSitePatterns EGF-like domain signature 1. 488 499 IPR000742 -
Seca4g11329 757 Pfam Protein of unknown function (DUF3522) 509 714 IPR021910 GO:0016020
Seca4g11329 757 Gene3D - 392 503 - -
Seca4g11329 757 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 2 754 IPR021910 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11329 Seca-Chr4 251849053 251858004 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11329 - - gmx:100777848 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11329 4 251849053 251858004 Seca4g11329 4 251849053 251858004 ECH
Seca4g11329 4 251849053 251858004 Seca2g00955 2 15399557 15408732 PCT