Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11238 ATGGGAGAAGCAACACAAAGGTATGCAGTTGTGACTGGTGCTAACAAAGGAATTGGATTAGAGATAGTTAGGCAGTTAGCTTCAGCTGGAATCAAGGTGGTGTTTACTGCAAGAGATGAGAAAAGGGGTCTTCAAGCATTGCAATCACTCAAAGCCTCAGGTCTATCTGACCTTGTTGTTTTTCATCAGTTAGATGTGGCTGATGCTGCAAGTGTAGCTTCTCTGGCTGATTTTGTCAAATCTGAATTTGGGAAACTTGATATTCTGGTTAACAATGCAGGGATTAGTGCAGTTGTAGTTAAAGACATTGATTTATTCAGTTCAGCTATCATTAATCGTGGGGCATTATCAGAAGATGACAGAAGAAAGGCAATAACTCAAACATATGAGTCAGCTAAAAATGCTGTCAAATAA 414 0.3937 MGEATQRYAVVTGANKGIGLEIVRQLASAGIKVVFTARDEKRGLQALQSLKASGLSDLVVFHQLDVADAASVASLADFVKSEFGKLDILVNNAGISAVVVKDIDLFSSAIINRGALSEDDRRKAITQTYESAKNAVK. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11238 137 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 136 - -
Seca4g11238 137 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Seca4g11238 137 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Seca4g11238 137 Pfam short chain dehydrogenase 8 98 IPR002347 -
Seca4g11238 137 Gene3D - 3 137 - -
Seca4g11238 137 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 98 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11238 Seca-Chr4 250934438 250937338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11238 9 94 Miscellaneous Gene Families AT2G29150 41.379 1.16e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11238 K15095 - gmx:100801677 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11238 4 250934438 250937338 Seca4g11238 4 250934438 250937338 ECH
Seca4g11238 4 250934438 250937338 Seca4g11239 4 250944812 250947092 PCT