Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11231 ATGTCTTCTTTTGTTGCTCTCCATAGCCTGCATGGCTCTCTTCTTCGATCCCAGTTCCTAGGCCAAGATAGCCTCATTCATCTCTACCCTCGCAGCAAGGCTTCCACCAATCACAGCAAACCAACCTACAACATAGTACAACCATGCGCCAAATTCGACATGCTGCAAATCATGGGAGGCAGAGGACTATGCAACGGAGAAGCAGGCCTTAAAGAAGAGCTGAAAAGGCAAGTTGGTGTTGATGATAAGCCACAATCATCAGCAACAAGTGACAAAGAACAAGAAGACTCAACAACACAGTCCTTTGAAAGTGTTGCAGAAGATGGTTTTGAGAAAGAGTTGATGGGGTTAACTGGGGGGTTTCCAGGGGGTGAGAAAGGGTTGAAAAAGTTCATTCAGGAAAACCCACCTCCCAAACCAGGTGCAGGAAACAAAAGGCTGAACCTTTCACTTTCAGAGAAGCCAAAACCACCGGAATTGCCTATGTTACTTCCAGGAATGATTGCCATTGTGAAGAATCCCAATAACCCATTTTACATGTACTGTGGTATTGTCCAAAGAATCACGGATGGAAAGGCAGGGGTTCTCTTTGAAGGAGGGAATTGGGATAAGTTGATCTCTTTCAGGCTGGAAGAACTGGAGCGCAGAGAAAAAGGCCCTCCCATGAAGAACCCCAAGTCCTGTGTGCTTGAACCTTTTCTTGAAAAGAAATCCTAG 717 0.4575 MSSFVALHSLHGSLLRSQFLGQDSLIHLYPRSKASTNHSKPTYNIVQPCAKFDMLQIMGGRGLCNGEAGLKEELKRQVGVDDKPQSSATSDKEQEDSTTQSFESVAEDGFEKELMGLTGGFPGGEKGLKKFIQENPPPKPGAGNKRLNLSLSEKPKPPELPMLLPGMIAIVKNPNNPFYMYCGIVQRITDGKAGVLFEGGNWDKLISFRLEELERREKGPPMKNPKSCVLEPFLEKKS. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11231 238 MobiDBLite consensus disorder prediction 125 147 - -
Seca4g11231 238 Gene3D - 158 227 - -
Seca4g11231 238 MobiDBLite consensus disorder prediction 76 103 - -
Seca4g11231 238 Pfam NAD(P)H dehydrogenase subunit S 163 214 IPR021659 GO:0009767
Seca4g11231 238 MobiDBLite consensus disorder prediction 216 238 - -
Seca4g11231 238 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 237 IPR021659 GO:0009767
Seca4g11231 238 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11231 Seca-Chr4 250849498 250850214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11231 K00345 - gmx:100527145 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11231 4 250849498 250850214 Seca2g01047 2 16955542 16956006 PCT