Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01047 ATGGCTTCTTTTGCTACTCTTCATGTGCTGCATGGCTCTCTTCTTCTTCGATCTGAGTTCCTAGGCCAAGACTACCACCTCACTCATCATAAACAACCTTCCACATCACATCAAAGAAGACCAACTTTTGAACTACAACCATGTGCCAAGTTCAACCTAATGGAAATCATGGGAGGAAGAGGACTATGTAATGGAGAAAAAGGCCTTCAACAAGAGCTGAAAAGGCAGGTTGATGAACAGCCACCACCACCACAACCACCATCAAGTGACAAAGAGCAAGAAAACTCAGGTGGATCAGCAGAGCTCAATAGTGATGGCAGTGTTACAGTACCAGAAGATGCTTTTGAGAAAGAAATGATGGGGCTAACTGGGGGGTTTCCTGGGGGTGAGAAAGGGTTGAAAAAATTCATTGAGGAAAATCCACCACCTACCAAATCAGAAACTATTCTCACCCTTTCACTTTGA 465 0.4409 MASFATLHVLHGSLLLRSEFLGQDYHLTHHKQPSTSHQRRPTFELQPCAKFNLMEIMGGRGLCNGEKGLQQELKRQVDEQPPPPQPPSSDKEQENSGGSAELNSDGSVTVPEDAFEKEMMGLTGGFPGGEKGLKKFIEENPPPTKSETILTLSL. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01047 154 MobiDBLite consensus disorder prediction 90 106 - -
Seca2g01047 154 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 148 IPR021659 GO:0009767
Seca2g01047 154 MobiDBLite consensus disorder prediction 61 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01047 Seca-Chr2 16955542 16956006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01047 K00345 - gmx:100776479 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11231 4 250849498 250850214 Seca2g01047 2 16955542 16956006 PCT