Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10926 ATGGAAGCTCCTGATTCAGCGTTGAACCGGATTGAACCGGGTTCAGAGAGCGGTTCGAGAGCAGAGATTGATACTTCGGCGCCGTTTGAGTCGGTGAAAGAGGCCGTCAACCGATTCGGCGGTGTTGGTTACTGGAAACCAAATCTCAATCATAATAATACTAACAACATTAAGCTCATGCTTCCTGGGCACCACACAGAAGAGCTTGACACTGGAAAACTGGAGGAGCAAGCAGCTGTATTGGAGAAAGAGCTGATCCTAAAGGAAAGGGAAACCCTTGATGTCTTGAAAGAGTTGGAAAGTACCAAAAGGCTTGTGGACAATTTGAAATCAAAGCTACAGACAGAAGAATCTGCAGCGAATTTGAATATTCAGATGAGTGTGTTTGATAATGTATTGTCTGTCAAGGAGAATGACAAAGAAGAAGAAAAGGAGAATCTAGTGAGTCATGTTCTTCAGCATTCAAAGGAAGGTGGTATCCCCTACCCTCCACCTGCTCCTGGTTTAATATTGAAGGAATTGAAGCAGGCAAAATTGAATCTGAACAGAACTACCAATGACATTGCTGATGTTCGGGCTTCTGTTGAATCACTCAATAAGAAGTTAGAGAAGGAAAGAATCTCGCTTGAGAAAACCCGTGAGAGGTTAACTCAGAATTCTTCAAAAATATCTTCTCTAGAGGAAGAGCTAAACCAGACAAGACAGAAACTGCAAGTGGCCAAGGATGCTGAAATTAAAGGTGGTATGGATGATCCTTCGGATATTACGAGAGAGCTCCAGCGATTGAGTTCTGAGGCAGAGCATTTCAAGAAAATGGGAGAAGCTGCAAAATCAGAAGTCTTGAGAGCAATGTCTGAGATTGAACAGACAAAAGCTATGATAAGAACTGCTGAAATAAGGTTGGTTGCTGCTAGAAAAATGAAGGAAGCTGCTAGAGCAGCAGAAGCTGCTGCACTAGCAGAGATCAAAGCTTTATCTTGTTGTAATGAGAGTTCACCTGGAGATTGTATGCAAAAGCATGATGCAGTTACTCTTTCCTTGGAAGAGTATACTGCTCTGACCAGCAAAGCTAGAGATGCAGAGGAAAATTCTAGGAAGAGGGTCCTAGATGCTATGCTTGAAGTTGATGAAGCAAATTTGTCAAAAATGGACATTTTAAAAAGGGTAGAGGAAGCTACAGAAGAAGTTAAAACCAGCAAAAAGGCCCTTGAGGAAGCTCTGGAAAGGGTAGAGGCTGCAAATAGAGGAAAGCTAGCAGTTGAAGAGGCTTTAAGGAAGTGGAGGTCTGAGGGTAACAAAAGACGTTCTATACATAATGCTACCAAGTTTAAAAATTCTTACCCCTCTCACCATCGGAGAGATTCGCGGTTACTTGGTGTAGATGGGCTGAATCTGGTGGTGGATGATGAAGCCAAGCCAGTTCTAAAGCCAACCCTATCCATAGGACAAATATTGAGCAGGAAGCTGATGCTGCCAGATGAGTTTGAAGGTGGCATGCTTGGAGAAAGAAGCTCAGTGAAACGGAAGGTGTCACTGGGTCAGATGCTAAGCAAACAAAACAATGATCCATCCTTTGACAGGCAGCAAGTTGAGAAAGAAAATGGTCAGAAGCAGTTTTCTGCAAAGAGAAAGAAATTTGGATTTGCTCGATTCTCCCTTCTTTTGACAAGACAACAAAAGAAGAAGAAGCCAACGTTGAACTTGAGGTGA 1710 0.4281 MEAPDSALNRIEPGSESGSRAEIDTSAPFESVKEAVNRFGGVGYWKPNLNHNNTNNIKLMLPGHHTEELDTGKLEEQAAVLEKELILKERETLDVLKELESTKRLVDNLKSKLQTEESAANLNIQMSVFDNVLSVKENDKEEEKENLVSHVLQHSKEGGIPYPPPAPGLILKELKQAKLNLNRTTNDIADVRASVESLNKKLEKERISLEKTRERLTQNSSKISSLEEELNQTRQKLQVAKDAEIKGGMDDPSDITRELQRLSSEAEHFKKMGEAAKSEVLRAMSEIEQTKAMIRTAEIRLVAARKMKEAARAAEAAALAEIKALSCCNESSPGDCMQKHDAVTLSLEEYTALTSKARDAEENSRKRVLDAMLEVDEANLSKMDILKRVEEATEEVKTSKKALEEALERVEAANRGKLAVEEALRKWRSEGNKRRSIHNATKFKNSYPSHHRRDSRLLGVDGLNLVVDDEAKPVLKPTLSIGQILSRKLMLPDEFEGGMLGERSSVKRKVSLGQMLSKQNNDPSFDRQQVEKENGQKQFSAKRKKFGFARFSLLLTRQQKKKKPTLNLR. 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10926 569 Coils Coil 71 91 - -
Seca4g10926 569 Coils Coil 96 119 - -
Seca4g10926 569 MobiDBLite consensus disorder prediction 517 539 - -
Seca4g10926 569 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g10926 569 Pfam Weak chloroplast movement under blue light 21 120 IPR008545 -
Seca4g10926 569 Pfam Weak chloroplast movement under blue light 172 434 IPR008545 -
Seca4g10926 569 Coils Coil 174 243 - -
Seca4g10926 569 MobiDBLite consensus disorder prediction 525 539 - -
Seca4g10926 569 Coils Coil 375 423 - -
Seca4g10926 569 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 21 127 - -
Seca4g10926 569 Gene3D - 170 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10926 Seca-Chr4 246901909 246904504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10926 - - gmx:100783770 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10926 4 246901909 246904504 Seca4g10926 4 246901909 246904504 ECH
Seca4g10926 4 246901909 246904504 Seca2g01306 2 21523670 21526693 PCT