Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01306 ATGAAAATGGAAGCCACTGACACGGGTTCCAAAATGGTCGAAACGACAACGAATCAAACCGAACTGGGTTCGGAGAAGAAGAAGAAGAGTTTCAGAGCGGAAATTGATACCTCGGCACCCTTTGAATCAGTGAAGGAGGCTGTCACTCGGTTCGAAGGCGTTGGTTACTGGAAACCCATTCACAATAACATTTCGTATGTGGGTTCTGATTCTGAGCGCCACATAGAAGAGATTGATGGGGAGAAACTGGAGGAGCAGGCAGTGGTATTGGAGAAAGAATTGATCCTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAGTACTAAAAGGCTTGTTGAGGATTTGAAGTTAAAGCTACAGAAGGAAGAATCAGAAGCGAATTTGATTAGCAAAATGAGTGTGTGTGATCAAAGATTGGTTGTGGAGAAGAAAGAAGAAAAGGAAAACCAAGTGAGTCACTTGGATGTTCCTCAACCTTTGAAGGAAGGTTTTATCCCTTACCCTTCATCTGCTCCTGGCTTAATACTAATGGAATTGAAGCAGGCCAAATTGAATTTAACCAAAACTACTAATGATCTTGCTGATGTACGAGCCACGGTTGAATCGCTTAATAAGAAGTTAGAGAAGGAAAGGATCTCACTTGAGAAAACCCGTGAAAGGTTAACTCAAAATTCTTCAAAAATATCTTCTCTTGAGGAAGAGATAAACCAGACCAGATTGAGACTTCAAGTGGCAAAAGATGCTGAAATTAAATGTGCTTCAGGTGATCCTTCAGATATTACAAGAGAGCTCCAACGATTGAGTTCTGAGGCGGAGCATTTCAAGAGAATGGGAGAATCTACAAAATCAGAAGTTTTGAAAACAATGTCTGAGATTGAACAGACAAAAACAATGATACGAACTGCAGAAATCAGGTTGGTTGCAGCCAGAAAAATGAAGGAAGCTGCTAGAGCTGCAGAAGCTGCTGCCCTTGCAGAAATCAATGCTTTATCTAACCATGAGAATTCACCTGGAGAGTGTATGCAAAAGCGCGACGAAATCACTCTCTCATTCGAAGAGTACACTGCTCTAACCTGCAAAGCTAGAGATGCTGAGGAACAATCCAAGAAGAGAGTTGCAGATGCTATGCTTGAAGTTGATGAAGCAAATTTGTCAAACATGGACATTTTGAAAAGGGTAGAGGAAGCTACAGAAGAAGTTAGAACCAGCAAGAAGGCCCTTGAAGAAGCTTTGGGGAGAGTAGAGGCTGCAGATAGAGGGAAGCTAGAAGTTGAAGAGGCTTTAAGGAAGTGGCGTTCTGAGGGCCACAAAAGACGTATACATAACTCTACTAAGTTCAAAAACTCTGGTCCATCTGAGCATAGAAGAGATTCTAGATTACTTGATGTGAATGGATTGAGTCTTGTAAATGATGAAGTCAAGCCAGTTCTAAAGCCAACCTTATCAATAGGACAAATACTAAGCAGAAAACTTCTTCTGCCACAAGAGTTTGAAGGTGGGAATATGGTGCATGCAGAGAGAATCTCAGTGAAAAGGAAGGTGTCATTGGGTCAGATGCTTAGCAAACAGAATGATGATTTTGATGGGCATGTTGAGAAAGAAAATGGCCAGAGCCAGAAGCAGTTTTCTGCTAAGAGAAAGAAGTTTGGATTTGCTAAATTCTCACTTCTTTTGTCAAAACAACAGAAGAACAAGAAGAAGAAGCCAATCCTGAATTTGAGGTGA 1734 0.4112 MKMEATDTGSKMVETTTNQTELGSEKKKKSFRAEIDTSAPFESVKEAVTRFEGVGYWKPIHNNISYVGSDSERHIEEIDGEKLEEQAVVLEKELILKERETLDVLKELESTKRLVEDLKLKLQKEESEANLISKMSVCDQRLVVEKKEEKENQVSHLDVPQPLKEGFIPYPSSAPGLILMELKQAKLNLTKTTNDLADVRATVESLNKKLEKERISLEKTRERLTQNSSKISSLEEEINQTRLRLQVAKDAEIKCASGDPSDITRELQRLSSEAEHFKRMGESTKSEVLKTMSEIEQTKTMIRTAEIRLVAARKMKEAARAAEAAALAEINALSNHENSPGECMQKRDEITLSFEEYTALTCKARDAEEQSKKRVADAMLEVDEANLSNMDILKRVEEATEEVRTSKKALEEALGRVEAADRGKLEVEEALRKWRSEGHKRRIHNSTKFKNSGPSEHRRDSRLLDVNGLSLVNDEVKPVLKPTLSIGQILSRKLLLPQEFEGGNMVHAERISVKRKVSLGQMLSKQNDDFDGHVEKENGQSQKQFSAKRKKFGFAKFSLLLSKQQKNKKKKPILNLR. 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01306 577 Gene3D - 178 351 - -
Seca2g01306 577 MobiDBLite consensus disorder prediction 1 31 - -
Seca2g01306 577 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 33 136 - -
Seca2g01306 577 Coils Coil 182 251 - -
Seca2g01306 577 Coils Coil 105 135 - -
Seca2g01306 577 Coils Coil 382 416 - -
Seca2g01306 577 Coils Coil 80 100 - -
Seca2g01306 577 Pfam Weak chloroplast movement under blue light 33 130 IPR008545 -
Seca2g01306 577 Pfam Weak chloroplast movement under blue light 180 441 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01306 Seca-Chr2 21523670 21526693 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01306 - - gmx:100785049 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10926 4 246901909 246904504 Seca2g01306 2 21523670 21526693 PCT