Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10868 ATGGCCACCCACCATTTCCTCACCCTCATGTTCTTCCTTCTCCTCTCTTTCCATACCCTCACTTTTTCTGTCACTGCAGAGGAAGAAGAAGACACCTTTGTCCGTCCAATAGACCGCAAGTTATTGGGCCTCAACAAGAAAGAAAAGCTTAGCCATTTCAGGTTCTACTGGCACGACATCTTGAGTGGACGAAATCCCACATCGGTTGCTGTTGTTCCCCCACCCTTGAAGCTTAACTCCACCACTGCCTTTGGCTTGGTCAACATGATCGACAACCCCTTGACCTTGGGACCCACATTGAATTCCAAGCTTGTAGGGAGGGCACAGGGATTCTATGCCTCTGCATCACAGAGTGAAATTGATTTGCTGATGGCCATGAATTTTGCCTTCATTGATGGGAAATATAATGGAAGCACCATCACCATCTTGGGGAGGAACCCTGTTTTTCATAAGGTCAGGGAAATGCCTGTGATTGGCGGTAGTGGCCTTTTCAGATTTGCTAGGGGCTATGGAGAAGCTAGAACTCACTGGTTTGATTACAAATCTGGGGATGCTGTAATTGAGTACAATGTTTATGTTTTCCATTATTGA 591 0.4619 MATHHFLTLMFFLLLSFHTLTFSVTAEEEEDTFVRPIDRKLLGLNKKEKLSHFRFYWHDILSGRNPTSVAVVPPPLKLNSTTAFGLVNMIDNPLTLGPTLNSKLVGRAQGFYASASQSEIDLLMAMNFAFIDGKYNGSTITILGRNPVFHKVREMPVIGGSGLFRFARGYGEARTHWFDYKSGDAVIEYNVYVFHY. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10868 196 Gene3D - 40 189 IPR044859 -
Seca4g10868 196 Pfam Dirigent-like protein 51 194 IPR004265 -
Seca4g10868 196 PANTHER NUCLEOPORIN-RELATED 38 192 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10868 Seca-Chr4 246226359 246226949 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10868 - - gmx:100808529 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10868 4 246226359 246226949 Seca4g10865 4 246197519 246198085 PCT
Seca2g01414 2 23751467 23752054 Seca4g10868 4 246226359 246226949 PCT