Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10865 ATGACTACCCAATCCTTTCTCATCTTCTTCCTTCTCCTCTCTTGCTACACCATCACCGCACACGAAGAAACCGGTTTCGTGCGCTCACTAGACCGTGAGTTAATGGAAAAGAAAGAGAACCTTAGCCACTTCAGGTTCTATTGGCAGGACATAGTGGGTGGAGACAACGCCACCTCAATTCCAATCATTCAACCACTCCCAAAGTTTATCAACACAACAGGTGCCTTTGGTTTGGTGAGAATCATCGACAACGCATTGACGTTGAGACCTGAAGTGAGTTCAAAGCTGGTGGGAAGGGCTCAAGGATTCTATGCGGCTACATCACAAACAGAGCTTGATTTGATGATGGTTATGAACTTTGTGTTGTTTGAAGGGAGGTATAATGGAAGCACTATCAGCATATTGGGGAGGAACGTGGCTTTCAATAAAGTTAGAGAGATGCCTGTGATTGGTGGTAGTGGGGTTTTTCGGTTTGCTAAGGGATATGTTGAAGCTAGCACTCACTCTTTTGATCCCAAATCAGGGGATACTACAGTTGAGTATAACGTTTATGTTTCCCATTATTGA 567 0.4427 MTTQSFLIFFLLLSCYTITAHEETGFVRSLDRELMEKKENLSHFRFYWQDIVGGDNATSIPIIQPLPKFINTTGAFGLVRIIDNALTLRPEVSSKLVGRAQGFYAATSQTELDLMMVMNFVLFEGRYNGSTISILGRNVAFNKVREMPVIGGSGVFRFAKGYVEASTHSFDPKSGDTTVEYNVYVSHY. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10865 188 PANTHER NUCLEOPORIN-RELATED 32 184 IPR004265 -
Seca4g10865 188 Gene3D - 28 184 IPR044859 -
Seca4g10865 188 Pfam Dirigent-like protein 42 185 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10865 Seca-Chr4 246197519 246198085 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10865 - - mtr:11413046 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10868 4 246226359 246226949 Seca4g10865 4 246197519 246198085 PCT