Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10809 ATGAGAATCTCAAAAATCCCCTTCCCTATCCTGATCGTACTTCATTGGATATTCCTCTTTCACAATATAATTCTGGTGTCTGGAATTTGTCATGATCATCAGCAGTCATTGCTGCTCCAATTGAAAAATGATCTCAATTTTAGTCATGTGTCTGCTATCAAACTAGTCTCTTGGAATCAAAGCCAAGAGTGCTGTCAATGGAATGGTGTAACATGTGACAATGAGGGACATGTGACAGGGCTTGACCTGAGCAAAGAATCAATTTCTGGCATATTGGAGAACTCAAGTAGCCTTTTTGATCTCCAATATCTTCAGATGTTGAATTTGGCTTATAACAACTTCCATTTTGTGTTTCCTTCCAAGTTTTACAAGCTAAAGGATTTGACTTATCTGAATTTATCAAATGCTGGGTTTGAGGGGCAGATTCCACTGGAGATATCTCACCTTACAAGGTTGTTCACTCTTGACATGTCTACCGATATAGCACCATCAAAGCTGAAACTGGAGAACCCGAATCTACAAATGCTTGTTCAAAATCTCACCAGTATCAGAAGATTGTATCTTGATGGAGTAAGCATATCAGATATGGGGCAGGAATGGTGCAGTGCTCTGTCATTACTATCTAGCTTGGAAGAATTGAGCTTGTCAAGGTGCAACCTCTCAGGTCCCATTGACTCTTGTTTGGGAAGGCTTAAACAACTCAGGATAATTCATCTCAATCAGAACAATTTGTCAGGGCCAGTGCCAGAATTGCTAGCTAATTTTTCAAATTTAGCCAGCTTGCAATTTAGTGACTGTGGATTGAGTGGAAGGTTTCCACAACAGGTTTTCCAGTTGAGAACACTGACCATGATTGACATATCTTACAACAATGACCTTCATGGCTCTTTTCAAGACTTCCCATTGAATGGATCTCTCCAAAGCTTGATAGTAAGTAACACAGGTTTCTCAGGGACATTACCAGATTCTGTACGTAATCTGAGGCAGTTATTAAGACTAGATCTTTCTAAATGCCAATTTAATGGAATGCTTCCCAGTTCACTGGTACAAATCACTGAACTTTCTTATCTGAACTTGTCTTCCAATGCCTTTACTGGTTCACTTCCATCATTTCATGCCAATAATTTCACCATGTCAATTCCATCCACTCACTTTGAAGGCCTCCTAAATCTTGTTGAAATTTACTTACAGAATAATTCATTTAGTGGTACCATCCCTTCATCTCTTTTTGCACTTCCACAACTGCTGAAGATTCAGCTTTTGTACAACCATTTTGAGGGTCAATTAGATGAGTTTTCTTCCTCCATACTAGATACTTTAGATTTAAGCCATAATAAATTAGAGGGTCCTGTTCCTATGTCTGTCTTTTATCTTAGAAATCTTAGTATACTTAAACTGTCTTCAAACAATCTGAATGGCACAATACACCTAGATGTGATTTGGAGACTTGAAAGTTTAACTACATTGGACCTTTCACACAACAAGTTTTTAGTTGATGTAAATGTCATAGATGCTCATCCCAATCAATCCAAATTAACCCATCTAGAGCTTTCTAGCAACCAGATTCAAGGAACAATACCCCACTGGATCTGGAATCTCCAATTTCTTGCTCATTTAGACCTTTCTCACAATTTGCTGACCAAGTTGGAAGAACCAATGCAGAAACCTAGTGACAATCTATTCTTGCTTGACCTCCATCATAACAATCTCCGCGGTTCACTTCCAACTTTTCCTAAAAATGCCACCTATTTGGACTTTTCCAGAAATAACTTCAGCTCTGTTGTTCCACCAGACATTGGTTATCATCTGTCTGCCACAATTTTTCTTTCTCTTTCACACAACAATTTCTATGGCCAGATTCCTGATTCCATGTGTGATGCTTCAAATCTTCAAGTACTTGACCTCTCAAGTAATGAGTTTGAAGGGACAATTCCTCCATGTTTGTCCAAAATTGAGACTCTGGGGGTGTTGAGTCTTCGCAAAAACAGGCTCACTGGCAGCATTCCTGACACATTTCCATTGTCATGTGCTTTAAGGACACTAGATGTTAAACAAAATGAATTAGATGGAGTGATTCCAAAGTCTCTTGCTAATTGTGTGACATTAGAGGTGTTGGACCTTGGAAGCAATCAGATTAATGATGTCTTCCCATGCATGTTAAAGAATATATCCACACTCAGAGTACTGGTTTTGAGGACAAATAGGTTCCAGGGTCCCATTGGATGTCCTAACACAAATGGCACTTGGAACATGCTACAAATTGTTGATTTAGCTTTCAACAACTTCAGTGGTAGTCTACCAGGAAGGATCTTTTTGACATGGACAATGATGATGTCTGAGGAGAATCAAGCTGCATCAGAGGTTAACCGAATAAGATTTCAGGTTGGTGGATTCAATGGTTTATATTATCAGGATGCGGTGTCAGTGACCTACAAAGGTCGACAAATGAGGTTGGTTAAAATTCTGACAGTTTTCACTTCTATAGATTTCTCTCATAACCATTTTGAGGGTCCAATACCGAAAGAACTAATGTATTTCAAAGCACTCTATGTGCTCAACTTGTCACATAATGCTCTCTCAGGTCAAATTCCATCCTCTATAGGAAATTTGAAAAAGCTTGAGTCCTTGGACCTGTCAGGAAACTTCTTGAGAGGAAAAATTCCCTCACAACTTGCAACTCTAACTTTCCTATCAGTCCTGAACCTCTCCTTTAATCATTTGGTGGGGAAGATCCCTACAGGTACTCAACTTCAAACATTTGAAGCAAGTTCCTTTGAAGGCAATGATGGCTTATATGGACCTCCATTAACTGCAAGTTCTGATAATCAAGTGCATGTGCTGTCACCTCCATCACCAACAGGGTCTGGAAGGTCGCTTGAAATTGATTGGAACATCTTAAGTGTGGAATTGGGATTGATTTTTGGCCTTGGAATTGTTATTGTGCCCCTTCTGTATTGTAAGCAATGGAGGGTACGGTATTGGAACCGTGTGGACAACATTCTCTGCTATATCTTCCCCCGGCTGCTGCATCTTGAATTTGAAAATCATGGAGGACAAACCAACATGATTTTGAGGTTGAGGAACAACCATTGTCATGATCTCTGA 3105 0.3948 MRISKIPFPILIVLHWIFLFHNIILVSGICHDHQQSLLLQLKNDLNFSHVSAIKLVSWNQSQECCQWNGVTCDNEGHVTGLDLSKESISGILENSSSLFDLQYLQMLNLAYNNFHFVFPSKFYKLKDLTYLNLSNAGFEGQIPLEISHLTRLFTLDMSTDIAPSKLKLENPNLQMLVQNLTSIRRLYLDGVSISDMGQEWCSALSLLSSLEELSLSRCNLSGPIDSCLGRLKQLRIIHLNQNNLSGPVPELLANFSNLASLQFSDCGLSGRFPQQVFQLRTLTMIDISYNNDLHGSFQDFPLNGSLQSLIVSNTGFSGTLPDSVRNLRQLLRLDLSKCQFNGMLPSSLVQITELSYLNLSSNAFTGSLPSFHANNFTMSIPSTHFEGLLNLVEIYLQNNSFSGTIPSSLFALPQLLKIQLLYNHFEGQLDEFSSSILDTLDLSHNKLEGPVPMSVFYLRNLSILKLSSNNLNGTIHLDVIWRLESLTTLDLSHNKFLVDVNVIDAHPNQSKLTHLELSSNQIQGTIPHWIWNLQFLAHLDLSHNLLTKLEEPMQKPSDNLFLLDLHHNNLRGSLPTFPKNATYLDFSRNNFSSVVPPDIGYHLSATIFLSLSHNNFYGQIPDSMCDASNLQVLDLSSNEFEGTIPPCLSKIETLGVLSLRKNRLTGSIPDTFPLSCALRTLDVKQNELDGVIPKSLANCVTLEVLDLGSNQINDVFPCMLKNISTLRVLVLRTNRFQGPIGCPNTNGTWNMLQIVDLAFNNFSGSLPGRIFLTWTMMMSEENQAASEVNRIRFQVGGFNGLYYQDAVSVTYKGRQMRLVKILTVFTSIDFSHNHFEGPIPKELMYFKALYVLNLSHNALSGQIPSSIGNLKKLESLDLSGNFLRGKIPSQLATLTFLSVLNLSFNHLVGKIPTGTQLQTFEASSFEGNDGLYGPPLTASSDNQVHVLSPPSPTGSGRSLEIDWNILSVELGLIFGLGIVIVPLLYCKQWRVRYWNRVDNILCYIFPRLLHLEFENHGGQTNMILRLRNNHCHDL. 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10809 1034 Gene3D Ribonuclease Inhibitor 501 943 IPR032675 -
Seca4g10809 1034 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 226 940 IPR046956 -
Seca4g10809 1034 Pfam Leucine rich repeat 437 496 IPR001611 GO:0005515
Seca4g10809 1034 Pfam Leucine rich repeat 511 570 IPR001611 GO:0005515
Seca4g10809 1034 Pfam Leucine rich repeat 678 736 IPR001611 GO:0005515
Seca4g10809 1034 Pfam Leucine rich repeat 848 907 IPR001611 GO:0005515
Seca4g10809 1034 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Seca4g10809 1034 Gene3D Ribonuclease Inhibitor 373 500 IPR032675 -
Seca4g10809 1034 Gene3D Ribonuclease Inhibitor 28 299 IPR032675 -
Seca4g10809 1034 SMART LRR_typ_2 533 563 IPR003591 -
Seca4g10809 1034 SMART LRR_typ_2 327 350 IPR003591 -
Seca4g10809 1034 SMART LRR_typ_2 388 412 IPR003591 -
Seca4g10809 1034 SMART LRR_typ_2 870 898 IPR003591 -
Seca4g10809 1034 SMART LRR_typ_2 231 254 IPR003591 -
Seca4g10809 1034 SMART LRR_typ_2 207 229 IPR003591 -
Seca4g10809 1034 SMART LRR_typ_2 458 482 IPR003591 -
Seca4g10809 1034 SMART LRR_typ_2 483 506 IPR003591 -
Seca4g10809 1034 Gene3D Ribonuclease Inhibitor 300 372 IPR032675 -
Seca4g10809 1034 SUPERFAMILY L domain-like 579 926 - -
Seca4g10809 1034 ProSiteProfiles Leucine-rich repeat profile. 535 556 IPR001611 GO:0005515
Seca4g10809 1034 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 577 778 - -
Seca4g10809 1034 PRINTS Leucine-rich repeat signature 483 496 - -
Seca4g10809 1034 PRINTS Leucine-rich repeat signature 437 450 - -
Seca4g10809 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 201 297 - -
Seca4g10809 1034 SUPERFAMILY L domain-like 63 193 - -
Seca4g10809 1034 SUPERFAMILY RNI-like 107 563 - -
Seca4g10809 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 817 939 - -
Seca4g10809 1034 Pfam Leucine Rich Repeat 629 650 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10809 Seca-Chr4 245483777 245486974 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10809 3 996 Receptor kinase-like Gene Family AT1G47890 32.514 7.50e-134 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10809 - - gmx:100806632 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10946 4 247211492 247212202 Seca4g10809 4 245483777 245486974 PCT