Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10776 ATGGGTGATTTCAACCTAGCCCTGGTGATCGTGGCGATCGTGGTGTGCGTGATCGTGTTCCTCTTCAATGTGTACCTTCTGGTGAACTACCAGCACCCTGATGATGTGAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTGGGGCTGTCTGTCGCCGCCATCTCCATACTCATGCTCCCGGCCGATGTCGCTAACCGCCACGCCTGTCGCCACGCGATCTACAACGGCGCGTGCAACCTCACGCTCCCCATGAAGGACCTATGGCTAGCCATTTACATTCTTGACGCCATTCTCGTCTTCTTTGTCATCCCCTTCGCCATGTTCTACTATGAAGGAGACCAAGACAAGAGTGTTGGCAAGCGGATTAAAAGCGCGTTGTTGTGGATGGTGACCACTGCTATCGTGTGCGCTCTCCTTCTGGGTATTTTGTATGGGCTTGTTGGGAAGGTGGATTTTACTGTGAGGCATCTCTCTTCTTCCACAAGTTCATTTCCTAGCTCATGGGACTTCAACAGTGGTCAACAATGTATTGGAAGTGGCTCCCACCAGTGTTCTGCATACTCTGCTAGTCCTTCCTCAGAGAAAACCTGGACCATGCGTACTACCTTTCCAGAATATGTTGTTGCTCTTGCTACTATTGTTGGATCTGTGCTTTTCGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATATTTTCATTTTTTCGGCGTCCGAAGGCTGTTATCACCCGATCACAATATATCAAGGAAGCAACTGAACTGGGTAAAAAGGCAAGAGAACTGAAGAAAGCAACTGAGTCACTTCATCAGGAAGAAAGAGGTGGTGCGAAGGGTAGGAAGTTTCGTAAAAATGTGAAAGCAGTAGAAAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAGGAGATGTATCCACAAGGGGAACAGGCTGAGACAACATGGGCACTAACAGTTCTTGGGTATCTGGCTAAACTTGTTTTGGGAATTTTAGGGTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATCATCTATCTATTAGTTGATCCTCCTCTTTCTCCTTTCCTAAATGAGGTTTTCATCAAGCTGGATGATATCTGGGGTCTTCTGGGTACAGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCCGTAATTGCTGGCGCCATGATGCTTGGGCTGAGATTAGTTTTCATTACCATACATCCTATGAAGTGGGGTGGAACTCTCATGAATTCATTTCTGTTCAATGTGGGGCTTATCCTTCTTTGTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCGGCACAGGAAATATTTGGCCACACTTTGGAGTCTCTCCGTGGAATTAAATATTTGTACAAGTACAACGTATTTCAGATTGCATTTGTTGTTTTGGCTGGATTAACATTCGTGTATTATGCTGCTTTTGGATGGAGAAGAAAGAAGCCCAGTGGCAGGTTCCAATTGTCTACATGA 1530 0.4569 MGDFNLALVIVAIVVCVIVFLFNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILMLPADVANRHACRHAIYNGACNLTLPMKDLWLAIYILDAILVFFVIPFAMFYYEGDQDKSVGKRIKSALLWMVTTAIVCALLLGILYGLVGKVDFTVRHLSSSTSSFPSSWDFNSGQQCIGSGSHQCSAYSASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFFRRPKAVITRSQYIKEATELGKKARELKKATESLHQEERGGAKGRKFRKNVKAVEKELFQLEEDVKLLEEMYPQGEQAETTWALTVLGYLAKLVLGILGFIVSVAWVAHIIIYLLVDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST. 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10776 509 Coils Coil 283 310 - -
Seca4g10776 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Seca4g10776 509 Pfam LMBR1-like membrane protein 9 274 IPR006876 -
Seca4g10776 509 Pfam LMBR1-like membrane protein 270 487 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10776 Seca-Chr4 244924536 244934222 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10776 K14617 - gmx:100796998 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10776 4 244924536 244934222 Seca4g10776 4 244924536 244934222 ECH
Seca4g10776 4 244924536 244934222 Seca2g01548 2 27663613 27669619 PCT