Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01548 ATGGGCGACTTCAACCTCGCCCTCGTGATCGTGGCCGCGGTGGTGTGCGTGATCGTGTTCCTCGTCAATGTGTACCTTCTCGTGAACTACCAGCACCCCGACGATGCGAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTTGGGCTCTCGGTGGCCGCCATCTCCATCCTCATGCTCCCCGCTGACGTGGCGAACCGGCAAGCGTGCCGGCACGCCATATACAACGGCGCGTGCAACCTCACTCTTCCGATGAAAGACCTCTGGCTCGTCGTTTACATCGTCGACGCCGTCCTCGTCTTCTTCGTTATTCCCTTCGCGATGTTCTACTACGAAGGTGACCAGGACAAGACTATGGGTAAAAGGATTAAGAGTGCGTTGTGTTGGATGGTGACGACGGCTATAGTGTGCGCTCTCATTCTGGGTATTTTGTATGGGCTTGTTGGTAAGGTGGACTTTACTGTTCGGCATCTCTCTTCATCAACAACTTCGTTTCCTAGCTCATGGGGCTTCAATAGTGGTCAACAATGTATTGGAAGTGGTGTCCATCAGTGCTCTGCATACTCTGCCAGTCCTTCATCAGAGAAAACTTGGACCATGCGTGCTACCTTTCCAGAATATGTTGTAGCTCTTGCTACTATTGTTGGATCTGTGCTTTTCGCTATATTTGGTGGTGTTGGTATTGCATCTCTTCCATTAGGACTTATTTTTTCATTTATCCGGCGTCCAAAGGCCGTCATCACTCGCTCACAGTATATCAAGGAAGCAACTGAACTGGGTAAGAAAGCAAGAGAACTGAAGAAAGCAGCTGAGGCACTCCGCCAGGAAGAAAAAGGTGGTTCAAAGGGTAGGAAATTTCGTAAAAATGTGAAAGAAGTTGAAAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAAGAAATGTATCCACAAGGGGAAAAGGTTGATAATCATATTTCTAAGTATTTAACTTCCAGCCATAATGCTGAGACAACATGGGCACTGACAGTTCTTGGTTATCTGGCAAAACTTGTTTTGGGAATTTTAGGGTTGATTGTTTCAGTGGCATGGGTTGCTCATATCATTATCTATCTATTAATTAATCCTCCCCTTTCTCCTTTCCTGAACGAAGTTTTCATCAAGCTAGACGATATCTGGGGTCTTCTTGGCACAGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGTGCGACGATGCTTGGGCTGAGACTGGTTTTCATTACCATACATCCCATGAAGTGGGGAGCAACTCTCATGAACTCTTTTCTGTTTAATGTGGGCCTTATCCTTCTTTGTTCCATTAGTGTGATCCAGTTTTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCCCAGGAAATATTTGGCCACACTTTGGAGTCTCTTCGTGGAATCAAATATTTGTACAAGTACAATGTATTTCAAATTGCATTTGTTGTCTTGGCCGGATTGACCTTTGTGTATTATGCTGCCTTTGGATGGAGAAGAAAGAAGCCAAGCGGCAGGTTCCAATTGTCTACATGA 1572 0.4587 MGDFNLALVIVAAVVCVIVFLVNVYLLVNYQHPDDANQAYFPKFVVVFGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLVVYIVDAVLVFFVIPFAMFYYEGDQDKTMGKRIKSALCWMVTTAIVCALILGILYGLVGKVDFTVRHLSSSTTSFPSSWGFNSGQQCIGSGVHQCSAYSASPSSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIASLPLGLIFSFIRRPKAVITRSQYIKEATELGKKARELKKAAEALRQEEKGGSKGRKFRKNVKEVEKELFQLEEDVKLLEEMYPQGEKVDNHISKYLTSSHNAETTWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLINPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGATMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01548 523 Coils Coil 256 276 - -
Seca2g01548 523 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 522 - -
Seca2g01548 523 Pfam LMBR1-like membrane protein 9 501 IPR006876 -
Seca2g01548 523 Coils Coil 283 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01548 Seca-Chr2 27663613 27669619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01548 K14617 - gmx:100816750 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10776 4 244924536 244934222 Seca2g01548 2 27663613 27669619 PCT