Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10584 ATGGAGTACGAAGACCGCTTCAGACAACAAGCTCAAAGACCAAAATATGATTGCCTTCTTTTTGATTTGGATGATACTTTGTATCCCCTCAGATCTGGTATTGCAAAAGCATGTCTTCAAAATATTAAAGATTACATGGTGGAGAAGCTTGGCATAGAACCAAGCAAAATTGATGACTTGTCCAATCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGGTATGACTTTGACTATGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGACAACTTAAAACCAGACCCAGTTCTAAGGAACCTGTTGCTGAGCCTGCCCTATAGGAAACTTATCTTCACAAACGCAGACAAAGTCCATGCTGTAAAGGCACTAAGCAGGCTTGGATTAGAAGACTGCTTTGAAGGAATTATATGCTTTGAGACTCTTAATCCAATCCACAAGAGCAGTGTTTCTGATGATGAAGATGACATTGAGTTTGTGGGTTCAAGGAGCACTAATCCAACCACTAGTAATGGTACAAGCAGCTCTCAAATCTTTGACATCATAGACCACTTTGCTCAGCCCAATCCAAGTGCAATCTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAATTGGCTCTCAAAATAGCCAACCTTGACCCACAAAGAACTGTAAGAAAAAAACCACCCTTTATGATCTAA 720 0.3986 MEYEDRFRQQAQRPKYDCLLFDLDDTLYPLRSGIAKACLQNIKDYMVEKLGIEPSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYDNLKPDPVLRNLLLSLPYRKLIFTNADKVHAVKALSRLGLEDCFEGIICFETLNPIHKSSVSDDEDDIEFVGSRSTNPTTSNGTSSSQIFDIIDHFAQPNPSAILPKTPIICKPSENAIELALKIANLDPQRTVRKKPPFMI. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10584 239 Gene3D - 104 232 IPR023214 -
Seca4g10584 239 SUPERFAMILY HAD-like 15 231 IPR036412 -
Seca4g10584 239 NCBIfam pyrimidine 5'-nucleotidase 17 231 IPR010237 -
Seca4g10584 239 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 231 - -
Seca4g10584 239 Gene3D - 8 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10584 Seca-Chr4 242072369 242075610 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10584 K07025 - gmx:100796466 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10584 4 242072369 242075610 Seca4g10584 4 242072369 242075610 ECH
Seca4g10584 4 242072369 242075610 Seca2g01872 2 38580422 38582673 PCT