Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01872 ATGGAGTATGAGGACCGCTTCAGACAGGCACAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCATTAAGCTCTGGTATTTCAAAAGCATGTGGCCAAAATATTAAAGACTATATGGTTGAGAAGCTTGGCATAGATAAAAGCATAATTAATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGGCATGACTTTGACTATGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGAGAACTTAAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTGCCTTATAGGAAACTTATCTTCACAAATGCAGACAAAGTCCATGCAGTTAAGGCACTTAGCAGACTTGGATTAGAAGACTGCTTTGAAGGAATTATATGCTTTGAGACCCTTAATCCCATCCACAAGAACACTGTTTCTGATGATGAAGATGAAGATGACATTGAGTTTATGAGTTCAACCACAAGTAAAACCAACAGTACTACTAGCAGCATCCAAATCTTTGACATAATTGGACATTTTGCTCAATCCAATCCAAGCACAGTTTTACCAAAAACACCAATTATATGCAAACCATCAGAAAATGCAATTGAATTGGCTCTCAAAATAGCCAACCTTAACCCACAAAGAACTGTAAGAAAACTTATTTTAATTTCTCTTATGTGTCACTTTCAGTTGTTCTTTGAGGACAGTGTCCGAAACATACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGTACATCTCAGAGAATTAAAGGTGCAGATTATGCCTTAGAAAGTATCCACAACCTTAGGGAGGCAGTACCTGAATTATGGGATGCTGACTTAAAATCAGAAGTTGCTTATCCTGGAAAGCTTGCTGTGGAGACATCTGTGACTGCTTAA 948 0.3882 MEYEDRFRQAQRPKYDCLLFDLDDTLYPLSSGISKACGQNIKDYMVEKLGIDKSIINDLSNLLYKNYGTTMAGLRAIGHDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAVKALSRLGLEDCFEGIICFETLNPIHKNTVSDDEDEDDIEFMSSTTSKTNSTTSSIQIFDIIGHFAQSNPSTVLPKTPIICKPSENAIELALKIANLNPQRTVRKLILISLMCHFQLFFEDSVRNIQAGKRVGLHTVLVGTSQRIKGADYALESIHNLREAVPELWDADLKSEVAYPGKLAVETSVTA. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01872 315 SUPERFAMILY HAD-like 13 292 IPR036412 -
Seca2g01872 315 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 294 - -
Seca2g01872 315 Gene3D - 80 293 IPR023214 -
Seca2g01872 315 SFLD C1.5.3: 5'-Nucleotidase Like 10 294 IPR010237 -
Seca2g01872 315 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 7 314 - -
Seca2g01872 315 NCBIfam pyrimidine 5'-nucleotidase 16 266 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01872 Seca-Chr2 38580422 38582673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01872 K07025 - gmx:100796466 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10584 4 242072369 242075610 Seca2g01872 2 38580422 38582673 PCT