Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10170 ATGGGTTGCACGGCGTCGAAACTGGACAACGAAGAAACGGTGCGGCGGTGCAAGGAGCGGCGCCGCCTAATGAGGGACGCCGTTTACGCGCGCCACCACCTCGCGGCGGCGCACTCAGACTACGTCCGCTCCCTCCGCCTCACTGGCTCCGCACTCTGCACGTTCGCCGCCGGCGAGCCTCTCGCCGTCTCCGACGACAGCCCCGCCGTCATCCTCAACCCCTCCACCACCAATAAAAACAACCACTCGCCGCCACATCCTCCTCCTCGTCCTCCTTCCGCCAACGTAACAACCGCTAAACTCCCTCAAGTCCTGTCTTCCTCCGCTGCCGGAACCCGCCTCCGCCGCAAACCGCTGCCGAAGCTTCCTCACATACTCTCTGAATCGAGCCTTTGCTCCTCGCCGAGAAGCCAAACATCGAACTCGTTCTTCCCAACCGCATATCAAGCTCAGTCCACAGCTTCCGAAACTTCTTCTGTTTGGAATTGGGAAAATTTCCAACCTCCTCCATCTCCTCCCGGCTCCGAATATTTCCGGCCGCGTTCTCAGCCGCCGGAAACACCAAATTCCGAATCCGATTTAGAATCCGAGTACAACTTGTTCCATTCCAAACCTCATCGTGAGAATCGCAAAATTGAAAATGCAAGCGTTGATTCTCGACAACAGCGCCATTTGGATCCTGAGGAGTTCGAAAGCGAGAGATCCGAATACGATTTCTTCGGCAAAACCGAACCCGTTAAGGTCGAGACGGAGCGGGAGGAGGTTCACTGCAGCGAGTGGGGAGACTGTTACAGCTCCACGAGCTCCTCGGAGAGGGACGAAGGGATTGCCGGCTTTGGATCGTCGATGAAAGCGGAGTCAGTCGCCGGCGGCGATGCTCCGCCGGCGAAGGAAGAGAAGGTCGATGAGGAGGTGATAAAGGTGAAGATGGTGTTGAGACACAAGGATTTGAAGGAGATTGTTGAAGCGATTATGGAGAACTTTGAGAAGGCTGCGGTTGCTGGAGATCAGTTATCGGAGATGCTCGAGATTGGCAGGGCTCAACTTGATCGGAGTTTCAAGCAATTGAAGAAAACTGTGTACCACTCAAGTAGTTTATTGAGCAGCCTGAGCTCGACTTGGACTTCAAAACCGCCATTGGCGGTAAAGTACAGGCTCGACGCCGGTTCTCTTGAAGGACCGGGCGGTCCGAAGAGTCTGTGCTTCACTTTGGACCGGCTTTTGGCTTGGGAGAAGAAGCTCTACCAGGAAGTGAAGGCTAGAGAAGGTGTGAAGATTGAGCATGAAAAGAAATTGTCAGCTCTGCAGAGTCAGGAATACAAGGGCGGTGATGAAGCAAAGGTGGACAAAATAAAGACTTCCATAACAAAGTTACAGTCGCTAATTGTTGTCACATCTCAGGCAGTGTCTACTACCTCAGCAGCCATTAATGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATCATGTACATGTGGAAATCAATGCACCAGTATCATGAAATTCAAAGCAACATTGTGCAGCAAGTCCGTGGCCTTGTGAACCAATCATCCAAAGGCCACTCAACATCTGAAACACACAAACAGGCAACTCGGGATCTTGAATCAGCTGTGTCAGCTTGGCACTCTAGTTTTTGCCGCCTTATAAAATTTCAAAGAGACTTCATCCTATCTCTACATGGCTGGTTTAAGCTGAACCTTATTCCTGTCAATAATGACAACATCAACGACATCATGGAACCATCTGATGTGTTTTTCTTCTGTGATGAATGGAAACTTGCTCTTGACCGTGTGCCAGACACAGTTGCTTCTGAAGCCATCAAAAGTTTTATCAATGTTGTCCATGTAATATCTGTCAAGCAATCAGAAGAGCTCAAGATTAGAAAGAGAACTGAGAATGCTTCCAAGGAACTTGAGAAAAAATCTTCATCCCTGAGAAATATAGAAAAGAAGTTTTACAACTCATATTCTATGGTAGGTATTGGCTTGCCTGACTCTGTGCCTGATAATGGACAAGGCTTAGATGCACGAGACCCACTTGCTGATAAAAAATTGGAACTAGCAGCATGCCAAAGGCGTGTTGAAGATGAAATGGTGAGGCACTCAAAGGCTATAGAGGTGACAAGAGCTATGACACTCAACAATCTACAGACAGGTTTGCCTGGAGTGTTTCAGGCATTGACAAGTTTTTCTTCCTTATTCACTGAGGCTCTTGAGTCAGTGTGTGCTCGTTCATATGCCATCAAGTAG 2268 0.4956 MGCTASKLDNEETVRRCKERRRLMRDAVYARHHLAAAHSDYVRSLRLTGSALCTFAAGEPLAVSDDSPAVILNPSTTNKNNHSPPHPPPRPPSANVTTAKLPQVLSSSAAGTRLRRKPLPKLPHILSESSLCSSPRSQTSNSFFPTAYQAQSTASETSSVWNWENFQPPPSPPGSEYFRPRSQPPETPNSESDLESEYNLFHSKPHRENRKIENASVDSRQQRHLDPEEFESERSEYDFFGKTEPVKVETEREEVHCSEWGDCYSSTSSSERDEGIAGFGSSMKAESVAGGDAPPAKEEKVDEEVIKVKMVLRHKDLKEIVEAIMENFEKAAVAGDQLSEMLEIGRAQLDRSFKQLKKTVYHSSSLLSSLSSTWTSKPPLAVKYRLDAGSLEGPGGPKSLCFTLDRLLAWEKKLYQEVKAREGVKIEHEKKLSALQSQEYKGGDEAKVDKIKTSITKLQSLIVVTSQAVSTTSAAINGLRDSDLVPQLVELCHGIMYMWKSMHQYHEIQSNIVQQVRGLVNQSSKGHSTSETHKQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKLNLIPVNNDNINDIMEPSDVFFFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIRKRTENASKELEKKSSSLRNIEKKFYNSYSMVGIGLPDSVPDNGQGLDARDPLADKKLELAACQRRVEDEMVRHSKAIEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCARSYAIK. 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10170 755 MobiDBLite consensus disorder prediction 162 235 - -
Seca4g10170 755 MobiDBLite consensus disorder prediction 182 196 - -
Seca4g10170 755 MobiDBLite consensus disorder prediction 197 235 - -
Seca4g10170 755 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Seca4g10170 755 MobiDBLite consensus disorder prediction 81 95 - -
Seca4g10170 755 Coils Coil 634 657 - -
Seca4g10170 755 MobiDBLite consensus disorder prediction 66 97 - -
Seca4g10170 755 PANTHER UNCHARACTERIZED 1 749 - -
Seca4g10170 755 Pfam Protein of unknown function (DUF632) 317 621 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10170 Seca-Chr4 235824658 235829990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10170 403 620 Acyl Lipid Metabolism Gene Families AT2G27090 32.301 1.20e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10170 - - gmx:100792843 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10170 4 235824658 235829990 Seca4g10170 4 235824658 235829990 ECH
Seca4g10170 4 235824658 235829990 Seca2g00727 2 10854395 10861804 PCT