Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00727 ATGGGCTGCACGGCGTCGAAGCTGGAAAACGAGGACACTGTGCGGCGGTGCAAGGACCGGCGCCGCCTCATGAAAGAAGCTGTCTACGCTCGCCACCACCTCGCCGCCGCTCAATCCGACTACTGCCGCTCCCTCCGTCTCACCGGCTCCGCCCTCTCCACCTTCGCCGCCGGCGAACCCCTCTCTGTCTCCGACAACACCCCCGCCGTTTTCATCAACCCAAAACCAACCGCCACCATCCATCACCCACCACAACCACAACCGCCACCGTCACATATTCCGTCACCGTCACCGTCCGTTCACCATCCTCCGCCGCCACGGTTCGACCCTTCACCTTCCCCAACCATAGCCAGTTCCAAGCTCCCCCATATACTCTCCTCCTCCAGCGTCGCCGCCTCCGCCACTACCAACCACCACCAACGCCGCCGCAAACCACCGCCACCGAAGCTCCCTCACATCCTCTCTGATTCTAGCCCTTCCTCCACCCCACGAAGCCAAGTTTCCAATTTCCCTTCAAATTTCTTCCCCACCGCACACTCCACATACTCTTCCACACCTTCCCAAACCTCCTCTGTTTGGAACTGGGAAAATTTCTACCCTCCTCCACCACCTCCTCCAGGTTCCGATTACTTCGACCATAGAGAACAACAGCAAGAAGAAGATTACGCAGCTGATTCACCTTCCCAATTCTCTTACAAATCCCGAAAGAGTGAAAGGAGTGAAAATGTTGATTCCCGAAAGCAACATCGTTACCCCACACATGATGCGGAAGGATTCGAATCAGAGAGATCCGAATATGACTATTTCAATGAAAAGCTCGCAACGGTTCAGGTTCAGAAGCATCGGGGTCATCATCTTCTTCCAGAGGAGTACACTGAGGCGGAAAGGGAAGAGGTTGAGTGTAGTGAATGGGGTGATCATTATAGCACTTCTACCTCCTCTGAAGATGATGATGAGGATGATGATGATGATGGGGTTGAAGGGGATGTTGAATCCAAGTCCGAGATGAGGACCCGGTCGAATTTCGGGTCGGAGCCTGCTGCGTCGGTGAAAGGGTATGCGATGGGGAAATCGGAGGATGCGACTTCATCATCGACAGGGACAGGGGAGGGAGTGATGGAGATGAAGATGGTGGTGAGGCACAAGGACTTGAAGGAGATTGTGGATGCTATCAAGGAGAATTTTGAGAAAGCTGCTTTTGCTGGGGATCAGGTTTCGGAGATGCTTGAGATCAGCAAGGCTCAGATTGATCGTAGTTTCAGGCAATTAAGGAAAACTGTGTATCACTCAAGTAGTTTATTAAGCAACCTGAGCTCAAGCTGGACCTCGAAACCGCCATTGACGGTTAAGTACCGGCTTGATGCCGGTTCACTGGATGAACCGGGCGGTCCAAAGAGTCTTTGCTCCACTTTGGAAAGGCTTTTGGCTTGGGAGAAGAAGCTCTACGAGGAAGTTAAGACCAGAGAAGGTGTGAAGATTGAACGTGACAAGAAATTGTCAGTGCTGCAGAATCAGGAATACAAAGGAGAGGATGAAGCAAAGATATTCAAAACCAAGTCTTCCATAAATAGGCTGCAGTCACTAATAGTTGTCACATCTCAGGCCGTGTCTACCACCTCAACTGCTATTATTGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATAATGTACATGTGGAGAGCAATGCACCAGTACCATGAAATCCAAAGCAACATAGTGCAGCAAGTCCGTGGCCTGGTGAACAGATCCTCAAGAGGTGACTCAACTTCTGAACTTCACAGGCAGGCAACTCGGGACCTTGAATCGGCCGTGTCAGCTTGGCACTCCAGTTTTATCCGCCTTATAAAATTTCAGCGCGATTTTATCCTCTCCTTACATGGCTGGTTCAAGCTCAGCCTCATTCCAGTCAACAATGAAAACATCAACAACAGCAGGGAATCCTCTGATGCATACATGTTTTTTGATGAATGGAAGCTTGCACTTGACCGTGTACCAGACACAGTTGCATCTGAAGCCATAAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAAGCTGAAGAACACAAGATCAAGAAAAGAACCGAGACTGCTTCCAAGGAACTTGAGAAAAAGGCTTCATCACTGAGAAATATAGAGAGAAAGTTTTACCATTCATATTCAATGGTAGGCATTGGCCTTCCTGACACTGCAGCTGATCATGGACAAGGGTTGGATGCGCGCGATCCGCTCGCTGAGAAGAAACTGGAACTTGCAACCTGTCAGAGGCGCGTTGAAGATGAAATGCTGAGGCATTCAAAGGCTGTTGAGGTAACAAGAGCTATGACACTCAACAATCTACAGACAGGTTTGCCTGGAGTTTTTCAAGCATTGACCAGTTTTTCTTCATTGTTCACTGAGGCTCTTGAGTCAGTATGCACTCGTTCATATGCCATCAAGTAG 2469 0.497 MGCTASKLENEDTVRRCKDRRRLMKEAVYARHHLAAAQSDYCRSLRLTGSALSTFAAGEPLSVSDNTPAVFINPKPTATIHHPPQPQPPPSHIPSPSPSVHHPPPPRFDPSPSPTIASSKLPHILSSSSVAASATTNHHQRRRKPPPPKLPHILSDSSPSSTPRSQVSNFPSNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPPGSDYFDHREQQQEEDYAADSPSQFSYKSRKSERSENVDSRKQHRYPTHDAEGFESERSEYDYFNEKLATVQVQKHRGHHLLPEEYTEAEREEVECSEWGDHYSTSTSSEDDDEDDDDDGVEGDVESKSEMRTRSNFGSEPAASVKGYAMGKSEDATSSSTGTGEGVMEMKMVVRHKDLKEIVDAIKENFEKAAFAGDQVSEMLEISKAQIDRSFRQLRKTVYHSSSLLSNLSSSWTSKPPLTVKYRLDAGSLDEPGGPKSLCSTLERLLAWEKKLYEEVKTREGVKIERDKKLSVLQNQEYKGEDEAKIFKTKSSINRLQSLIVVTSQAVSTTSTAIIGLRDSDLVPQLVELCHGIMYMWRAMHQYHEIQSNIVQQVRGLVNRSSRGDSTSELHRQATRDLESAVSAWHSSFIRLIKFQRDFILSLHGWFKLSLIPVNNENINNSRESSDAYMFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQAEEHKIKKRTETASKELEKKASSLRNIERKFYHSYSMVGIGLPDTAADHGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK. 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00727 822 MobiDBLite consensus disorder prediction 113 136 - -
Seca2g00727 822 PANTHER UNCHARACTERIZED 1 816 - -
Seca2g00727 822 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Seca2g00727 822 Coils Coil 701 721 - -
Seca2g00727 822 MobiDBLite consensus disorder prediction 59 263 - -
Seca2g00727 822 MobiDBLite consensus disorder prediction 285 304 - -
Seca2g00727 822 MobiDBLite consensus disorder prediction 232 263 - -
Seca2g00727 822 Pfam Protein of unknown function (DUF632) 384 688 IPR006867 -
Seca2g00727 822 MobiDBLite consensus disorder prediction 59 73 - -
Seca2g00727 822 MobiDBLite consensus disorder prediction 154 196 - -
Seca2g00727 822 MobiDBLite consensus disorder prediction 313 329 - -
Seca2g00727 822 MobiDBLite consensus disorder prediction 79 112 - -
Seca2g00727 822 MobiDBLite consensus disorder prediction 285 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00727 Seca-Chr2 10854395 10861804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00727 1 92 Acyl Lipid Metabolism Gene Families AT2G27090 31.959 1.21e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00727 - - gmx:100815888 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00727 2 10854395 10861804 Seca2g00727 2 10854395 10861804 ECH
Seca4g10170 4 235824658 235829990 Seca2g00727 2 10854395 10861804 PCT