Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09258 ATGTTGGAGCCAAAGAAACCCCCAAAGAACAGGGGGTTCTATGTGAAGATGAAGCTTTTGCATAAACATCACGGAACCATTAGGCCTCAACAAGACAAAACCTGCTGCTTCTATTCATATTACAAATGGATTCTCTGGTTTTCTCTCTCCCTCTATTTCTTCACTTCTTATCTCATCAGCAACGACCCCAACACTGAACCAACCTCTCCAGACACAACAGTCTCAAATTCCAAATCCAGCATTGTCTCTCGTGCCCTTTTCGAATCCACCAATGCCACCACAGCCCATGGGGAACTGAAGAATTTGAAGGTCTTCATCTACGACCTTCCTCCTAACTACAACACCGATTGGCTCACGAACGAGAGGTGTAGCAGGCATTTATTTGCATCAGAAGTTGCTATACACAGAGCATTGTTAACAAGCGAAGTGCGCACTTTAGACCCATATGAAGCAGACTTCTTCTTCGTCCCTGTCTACGTCTCCTGCAACTTCAGCACCGTTAATGGCTTCCCTTCAATTAGCCACGCGCGCTCTCTCATATCCTCCGCAGTGCAACTTGTCTCCTCTGAGTACCCATTCTGGAACCGAACCTCAGGATCTGACCACATCTTCGTCGCTTCCCACGACTTCGGCGCATGCTTCCACACCATGGAGGATGTGGCTATGGCGGATGGGATACCGCAAATCTTGAAGAACTCGATTGTGTTGCAGACGTTTGGTGTCGTTCACGAGCATCCTTGCCAGGACGTTGAGAATGTGGTGATACCGCCTTACGTTTCGCCGGAAAGTGTACGGAACACGCTTGAGAGTGCTCCGGTGAACGGAAAGCGAGACATTTGGGTTTTTTTCCGTGGCAAAATGGAGGTTCATCCTAAAAATATTAGTGGACGGTTTTACAGCAAACGAGTGAGGACGGCGATATGGCGGAAGTTTAATGGTAACCGGAGGTTTTACTTGCGGAGGCATAGATTTGCCGGTTACCAGTCGGAAATTGCACGGTCAGTGTTTTGTTTGTGTCCGCTTGGGTGGGCCCCGTGGAGTCCGAGACTGGTTGAATCGGTTGCGTTAGGGTGTGTGCCGGTTGTGATTGCGGATGGGATCCGGTTGCCGTTTCCCTCCGCCGTGGACTGGCCGGAGATATCTTTGACGGTGGCGGAGAAGGACGTGGGGAAGCTTGACAAGATCTTAGAGCGCGTGGCTGCGACGAACCTAAGCGCTATTCAGAAGAACCTGTGGGACCCAAGAACGAGGCGGGCCCTGCTTTTCAACCGTCAACTTCAGGAAGGTGATGCCACGTGGCAGGTTATGGTTAGTCTGGGTCAGAAGCTGGGTAGGTCCTACCGTAGGTCCATGGTTCCTGGCCAATTGGAGAAGGACACGTGA 1383 0.5061 MLEPKKPPKNRGFYVKMKLLHKHHGTIRPQQDKTCCFYSYYKWILWFSLSLYFFTSYLISNDPNTEPTSPDTTVSNSKSSIVSRALFESTNATTAHGELKNLKVFIYDLPPNYNTDWLTNERCSRHLFASEVAIHRALLTSEVRTLDPYEADFFFVPVYVSCNFSTVNGFPSISHARSLISSAVQLVSSEYPFWNRTSGSDHIFVASHDFGACFHTMEDVAMADGIPQILKNSIVLQTFGVVHEHPCQDVENVVIPPYVSPESVRNTLESAPVNGKRDIWVFFRGKMEVHPKNISGRFYSKRVRTAIWRKFNGNRRFYLRRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFPSAVDWPEISLTVAEKDVGKLDKILERVAATNLSAIQKNLWDPRTRRALLFNRQLQEGDATWQVMVSLGQKLGRSYRRSMVPGQLEKDT. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09258 460 Pfam Exostosin family 100 398 IPR040911 -
Seca4g09258 460 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 84 419 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09258 Seca-Chr4 219748130 219750449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09258 K20889 - gmx:100797984 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04172 4 74977046 74979143 Seca4g09258 4 219748130 219750449 PCT