Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04172 ATGGCGGAGCAGAAAAGACCCTCAAAGAACAGGGGGTACTATGTTAGAATGAAGCTCCTGCACAAACATGGCAGAACTCAACAAGAGAAGAGCTGCTTCTACAGATACTACAAATGGGTCCTTTGGCTTTCTTTATCCCTCTATTTCTTCACCTCTTACCTCATCAGCAACAACCACCACCACCATCACCCCGCACCAGACAAAACTACAACCCATGTCTCAAGAGCACTTTCCGAATCCTCAACTACCAACACCACAGCTCCACCACAAGCTCGAAACACTCTGGGAGGTGGGTCGCTGAAGAACATGAAGGTGTTCGTCTACGATCTTCCTCCGAAGTACAACACCGATTGGCTTGTGAACGAGAGGTGCAGCAGACATTTGTTTGCTTCTGAGGTTGCCATTCACAGGGCTCTGTTGACCAGCGAGGTGCGAACTTTTGACCCTTACGAAGCTGATTTCTTCTTCGTTCCTGTTTACGTTTCTTGCAACTTCAGCACCGTGAATGGCTTCCCGGCGATCGGTCACGCGCGCTCTCTAATCGCCTCAGCAGTGAAACTCATCTCCTCGGAATACCCATTCTGGAACCGTAGCAGAGGTTCGGACCATGTCTTCGTCGCTTCCCATGACTTCGGCTCTTGTTTCCACACTCTGGAGGACGTGGCGATGGCAGATGGGGTGCCAGAAATCATGAAGAACTCGATTGTGTTGCAAACCTTTGGCGTTATGTACAATCATCCGTGCCAGCAAGTTGAGCATGTGGTGATTCCGCCGTATGTTTCGCCGGAGAGTGTACGGAACACGATTGAGAATTTTCCGGCGAACGGACGGCGAGATATTTGGGTTTTCTTCCGGGGGAAAATGGAGGTCCATCCTAAGAACGTTAGTGGGCGGTTTTACAGCAAGAAAGTGCGGACGGAGATATGGCGGAGGTTCAACGGTGACCGGAGGTTTTACCTGCGGAGGCATAGGTTTGCCGGTTACCAGTCAGAGATTGCACGTTCCGTGTTCTGTCTATGCCCTTTGGGGTGGGCCCCGTGGAGTCCGAGGCTGGTTGAATCGGTTGCTTTGGGCTGTGTGCCGGTTGTCATTGCGGATGGTATCCGGTTGCCGTTTCTCTCCGCCGTGCGATGGTCGGAGATATCGGTGACGGTGGCGGAGAGGGACGTGGGGAGGCTGGCGGAGATACTTGACCACGTGGCGGCGACCAACCTCAGTGCCATTCAGAGGAATCTGTGGGACCCACGCACAAGGAAAGCCCTGCTTTTCAATAGTCAGGTCCAGGAAGGTGATGCCACGTGGCAGGTCCTACGTGCTTTGAGCGAAAAGCTGGATAGGTCTTATAGGGGATCCAGGGTTTCACGCCAATTGGATTTTGACACGTGA 1386 0.526 MAEQKRPSKNRGYYVRMKLLHKHGRTQQEKSCFYRYYKWVLWLSLSLYFFTSYLISNNHHHHHPAPDKTTTHVSRALSESSTTNTTAPPQARNTLGGGSLKNMKVFVYDLPPKYNTDWLVNERCSRHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVKLISSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIMKNSIVLQTFGVMYNHPCQQVEHVVIPPYVSPESVRNTIENFPANGRRDIWVFFRGKMEVHPKNVSGRFYSKKVRTEIWRRFNGDRRFYLRRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFLSAVRWSEISVTVAERDVGRLAEILDHVAATNLSAIQRNLWDPRTRKALLFNSQVQEGDATWQVLRALSEKLDRSYRGSRVSRQLDFDT. 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04172 461 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 75 421 IPR004263 GO:0006486|GO:0016757
Seca4g04172 461 Pfam Exostosin family 101 398 IPR040911 -
Seca4g04172 461 MobiDBLite consensus disorder prediction 71 96 - -
Seca4g04172 461 MobiDBLite consensus disorder prediction 61 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04172 Seca-Chr4 74977046 74979143 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04172 K20889 - gmx:100818569 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04172 4 74977046 74979143 Seca4g04172 4 74977046 74979143 ECH
Seca4g04172 4 74977046 74979143 Seca4g09258 4 219748130 219750449 PCT