Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09208 ATGTTTTGGAAGCTCGCCTCTCTTTCTGCTTCTTCCCCCGTGGAGGCAATACTAGACAAGGATAATTTCACTTTAGAAGAGCTTCTGGATGAAGAGGAAATAATCCAGGAATGCAAGGCCTTAAACAGTCGACTTATCAACTTTCTGAGAGATCCAGCTCAGGTTGAACAATTGTTACGCTACATTATTGAAGAACCACCAGAAGATGCTGAAAGTAAACGGGCCTTCAAGTTTCCATTCATTGCCTGTGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGATGAAGAGGAGCTGATGAACTTATTATTCTCCTTTTTGGAGCCAAGTCGGCCACATAGTGCCTTGCTGGCTGGCTACTTTAGCAAGGTGGTTGTTTGCCTGATGATTCGAAAGACAGTGTCACTTATGAATTATGTTCAAGCCCATCAGAATGTTTTTCGCCAACTGGTTGATTTGATAGGAATTACATCTATTATGGAGGTTTTGGTCCGATTAGTAGGCGCTGATGACCATGTGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTTGAGATGATTGTTGATAAATTAAGTCCATCTTGTCCTCCTGAAGTTCATGCCAATGCAGCTGAAACATTATGTACAATAACTCGAAATGCCTCATCTACTCTAGCAATTAAACTTTCAAGTCCAAGTTTTGTTGCAAAAATTTTGGGTCATGCATTGGAAGATTCATTATTGAAGAGTAGCCTTGTGAACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAGATCTGCTATATCATCACCCCTTTTTCATTCATTCCGGAATCAGCACATGTATGAGCCACCAATTCCTGTAAACCCAGAGACTATTGGTGCAATGCTCCCTAAACTTAGTGAATTGCTAATGCTTTTGAATGTATCATCTGATGAAAAAGTATTGCCTACAACATATGGAGAATTGAGACCTCCACTTGGAAAGCATAGATTAAAGATTGTCGAGTTCATTGCAGTCCTTTTAAAAACTGGAAATGAAGCAGCAGAAAAAGAAATGGTCAACTCAGGAACCATTCAACGAGTTATTGATCTTTTCTTTGAGTATCCATACAATAACTCATTACACCATCATGTAGAAAGTATTGTATTATCATGTTTGGAGAGTAAAACTGATGCCATTGTTGATCATCTTCTTCGGGATTGTGATTTAATTGGAAGAATTCTCCAAGCCGATAAACATTGTATTCTCTCTGCTGATAGAAATTTGCCAACAGTACCTGCTGCTGGGAAACAGGCACCACGGGCAGGAAATATTGGGCATATTACCCGAATTGTTAACAAACTTGTTCACTTGGCACATAATCGAAGCCACATACTGACATGTCTTCAGGAAAATAGTGAATGGTGTGAGTGGCAAGCTACAATTCTACAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCGACTGCTTTACAAGATAGGATGAGGGATAGTGATGATGATGACCTTCATGACAGGGACTATGATGTTACAGCTTTAGCTAATAATTTGAGCCAGGCTTTTAGATATAAAATTTATGGGAATGAGGATAATGAAGAGGAACGTGGCAGCCTTGATCGAGATGATGAGGTAGTAGTTTTGTTCATTCTCGGTAACTGTTGTAATTTTATTTGGTTGATTTTGGGGATTTAG 1725 0.3959 MFWKLASLSASSPVEAILDKDNFTLEELLDEEEIIQECKALNSRLINFLRDPAQVEQLLRYIIEEPPEDAESKRAFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLEPSRPHSALLAGYFSKVVVCLMIRKTVSLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLSPSCPPEVHANAAETLCTITRNASSTLAIKLSSPSFVAKILGHALEDSLLKSSLVNSLSVCISLLDPKRSAISSPLFHSFRNQHMYEPPIPVNPETIGAMLPKLSELLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEAAEKEMVNSGTIQRVIDLFFEYPYNNSLHHHVESIVLSCLESKTDAIVDHLLRDCDLIGRILQADKHCILSADRNLPTVPAAGKQAPRAGNIGHITRIVNKLVHLAHNRSHILTCLQENSEWCEWQATILQERNVVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVTALANNLSQAFRYKIYGNEDNEEERGSLDRDDEVVVLFILGNCCNFIWLILGI. 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09208 574 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 553 IPR007587 GO:0019903|GO:0043666
Seca4g09208 574 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Seca4g09208 574 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09208 Seca-Chr4 218536398 218546453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09208 K15501 - gmx:100802276 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04106 4 73012655 73023038 Seca4g09208 4 218536398 218546453 PCT