Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04106 ATGTTCTGGAAGCTTCCCTCTATCTCTGCCTCTTCTCCTGTGGATGCAATATTGGACAAGGAGAACTTCACTTTGGAAGAGCTATTGGATGAAGAGGAAATAATCCAAGAATGCAAAGCCTTAAACAGTCGTCTCATCAACTTTCTGAGAGATAGAGCTCAGGTTGAGCAATTGCTACGCTACATTATCGAAGAACCACTGGAAGATGCTGAAAACAAACGGGTATTCAAGTTTCCATTCATTGCCTGTGAGATCTTCACATGCGAAATTGATGTCATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGAACTTATTATTCTCCTTCTTGGAACCTGATCGAGCTCATAGTACCTTGCTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTACCACTTATGAATTATGTTCAAGCCCATCAGCATGTTTTTCGCCAACTTGTTGATTTGATAGGCATTACATCTATTATGGAGGTTTTGGTTCGATTAGTTGGTGCTGATGACCATGCTTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTAGAGATGATTGTTGATAAATTAAGTCCTTCTAGTTCTCCTGAAGTGCATGCCAATGTAGCTGAAACTTTATGTACAATAACTCGAATTCCATCATCTACTCTTGCAATTAAGCTTTCAAGTCCATGTTTTGTTGCAAAAATTTTGGATTATGCATTGGAAGATTCACAATCAAAGTCCAGCCTTGTCAACTCACTTTCGGTGTGTATTTCTTTGTTGGATCCCAAAAAATCAGCTGCTCCATCTCCCCTTTTTCATTCATTCCGAAGTCAAAACATGTATGAGCCACCGATTCCTGTAAACCCAGATACTATTGGTGCAATGCTCCCTAAATTTGGTGAATTGCTTGTGCTTTTGGATGTGTCATCCGATGACAAGGTATTGCCTACAACATACGGCAATTTGAGACCTCCACTTGGCAAGCATCGATTAAGGATCGTGGAGTTCATTGCAGTACTTTTAAAAACTGGAAATGAAGTGGCAGAAAAAGAATTGGTTAACTCAGGAACCATTCGACGAGTTGTTGACCTTTTCTTTGAGTATCCATACAATAACTCATTGCACCATCATGTAGAAAGTATCATATTATCATGTTTGGAGAGCAAAACCGATGTCATTGTTGATCATCTTCTTCGAGATTGTGATTTAATTGGAAGGTTTCTCCAAACAGATAAACATTGTATTCTGTCTGCTGAAAGCAATCAGCCTACACTCCCCGCTGCTGGAAAACGGCCAACACGGGTAGGAAACATTGGACATATTACTCGAATTGCTAATAAACTTGTTCACTTGGCTCATAACCAAAGCCGCATTCTAGCATGTCTTCAGGAGAACAGTAGGTGGAATGAGTGGCAAGCTACAGTTCTTCAGGAACGTAATGTGGTTGAGAATGTTCACCGCTGGGCTTGTGGACGTCCAACTGCATTACAAGATAGGATGAGGGATAGTGATGACGATGATCTTCATGACAGAGACTATGATGTTGCAGCTTTAGCAAATAATTTGAACCAAGCTTTTAGATACAAAATTTATGGAAATGAGGATAATGAAGAGGAACGTGGTGGTCTTGATCGAGATGATGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTAGTCATATCATCCCTAAGACTTGGTGATGATCAAGGGAGACATGTAGTTACTGGCTGTTCAATCCTTGGGTGGCAAAACCTAGTTAAGTAA 1785 0.4045 MFWKLPSISASSPVDAILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYIIEEPLEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLEPDRAHSTLLAGYFSKVVVCLMIRKTVPLMNYVQAHQHVFRQLVDLIGITSIMEVLVRLVGADDHAYPNFIDVMQWLAESNLLEMIVDKLSPSSSPEVHANVAETLCTITRIPSSTLAIKLSSPCFVAKILDYALEDSQSKSSLVNSLSVCISLLDPKKSAAPSPLFHSFRSQNMYEPPIPVNPDTIGAMLPKFGELLVLLDVSSDDKVLPTTYGNLRPPLGKHRLRIVEFIAVLLKTGNEVAEKELVNSGTIRRVVDLFFEYPYNNSLHHHVESIILSCLESKTDVIVDHLLRDCDLIGRFLQTDKHCILSAESNQPTLPAAGKRPTRVGNIGHITRIANKLVHLAHNQSRILACLQENSRWNEWQATVLQERNVVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLNQAFRYKIYGNEDNEEERGGLDRDDEDVYFDDDSAEVVISSLRLGDDQGRHVVTGCSILGWQNLVK. 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04106 594 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 586 IPR007587 GO:0019903|GO:0043666
Seca4g04106 594 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Seca4g04106 594 Pfam SIT4 phosphatase-associated protein 131 355 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04106 Seca-Chr4 73012655 73023038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04106 K15501 - gmx:100790416 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04106 4 73012655 73023038 Seca4g04106 4 73012655 73023038 ECH
Seca4g04106 4 73012655 73023038 Seca4g09208 4 218536398 218546453 PCT